Pairwise Alignments

Query, 288 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 262 a.a., AraC family transcription regulator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  114 bits (284), Expect = 3e-30
 Identities = 74/231 (32%), Positives = 120/231 (51%), Gaps = 8/231 (3%)

Query: 38  VQQGHKRVRWQQREVVAHAGELLIIDGGQTVDIINELSEDGVFSCQLLTCDPQLLT-LSP 96
           + QG K +      +VA  GEL+II     ++IIN+ +++G F   LL   P+++     
Sbjct: 37  ITQGSKVIIQDDSRLVAGPGELIIIPANTPLEIINQPAQNG-FRSDLLLLSPEIIARFKT 95

Query: 97  PQVESTSPTPFDAVMTLCNLPCALMHSFETTSLALALKQRFPTVIIRHKMLEILLWLKQF 156
             V+   P    ++ T    P +   +F   ++  A++Q  P  +  H+ + +LL L   
Sbjct: 96  MYVQDYPPANLTSLCT----PMSRSLTFMWENVLDAVRQGLPVGLQEHQAMGLLLALLHD 151

Query: 157 NIS--FIHNEARNLTQRVRRCLATDPHNIWTAAEVAETLSMSEVVLRRKLSAENTALRNL 214
             +   +      LT++VR+ +   P  +WTA E+A  L+M    LRR+L  E+ + R +
Sbjct: 152 GAAGPLLIERRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQRESQSYRQI 211

Query: 215 MIDVRMSSALALLQSTDWPISAIAQHVGYESASRFAERFRKRFGFAPTAIR 265
           + +VRMS AL+ LQST  PI  IA   GY S SRF  RFR+ +G  P+ +R
Sbjct: 212 VEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQVR 262