Pairwise Alignments

Query, 263 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 623 a.a., fused predicted peptide transport subunits of ABC superfamily: ATP-binding components (RefSeq) from Escherichia coli BW25113

 Score =  142 bits (357), Expect = 2e-38
 Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 2/230 (0%)

Query: 29  LQPTDLNLYSAQRVGLVGCSGAGKSTLLKLLLALETADAGHIMCQGEEIRPAPVHRLRWY 88
           ++    +L+  + + LVG SG+GKST  + LL L  +  G I+  G+ I      +L+  
Sbjct: 340 VEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQAL 399

Query: 89  RRLVQYVPQDAHASLNPRHRVAELITAPLRQLG--PRQDWGIAAERALRQVELDESLLYV 146
           RR +Q++ QD +ASL+PR  + + I  PLR  G  P +D        L +V L     + 
Sbjct: 400 RRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWR 459

Query: 147 RAGQLSGGQAQRVALARAIALKPRFLLADEPVSGLDLPLRQQIIALLDQIARQQNMGMLL 206
              + SGGQ QR+ +ARA+AL P+ ++ADE VS LD+ +R QII LL  + R   +  L 
Sbjct: 460 YPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLF 519

Query: 207 VSHDISLVAALCQRTLVMASGVIVEDRPTHELLHAPRHSATRRLIDAIPL 256
           +SHD+++V  +  R  VM  G IVE  P   +   P+H  TR+L+ A+P+
Sbjct: 520 ISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPV 569



 Score =  119 bits (299), Expect = 1e-31
 Identities = 81/239 (33%), Positives = 129/239 (53%), Gaps = 17/239 (7%)

Query: 35  NLYSAQRVGLVGCSGAGKS-TLLKLLLALETADAGHIMCQGE----------EIRPAPVH 83
           +L   + + +VG SG+GKS T L L+  LE A  G + C             E+      
Sbjct: 38  SLQRGETLAIVGESGSGKSVTALALMRLLEQA-GGLVQCDKMLLQRRSREVIELSEQNAA 96

Query: 84  RLRWYRRL-VQYVPQDAHASLNPRHRVAELITAPLR--QLGPRQDWGIAAERALRQVELD 140
           ++R  R   +  + Q+   SLNP   V E I   +R  Q   R++  + A+R L QV + 
Sbjct: 97  QMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIP 156

Query: 141 ES--LLYVRAGQLSGGQAQRVALARAIALKPRFLLADEPVSGLDLPLRQQIIALLDQIAR 198
           E+  +L     QLSGG  QRV +A A++ +P  L+ADEP + LD+ ++ QI+ L+  + +
Sbjct: 157 EAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQK 216

Query: 199 QQNMGMLLVSHDISLVAALCQRTLVMASGVIVEDRPTHELLHAPRHSATRRLIDAIPLL 257
           + +MG++ ++HD+ +VA +  R LVM  G  VE     ++ HAP+H  TR L+ A+P L
Sbjct: 217 EMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQL 275