Pairwise Alignments

Query, 263 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  143 bits (361), Expect = 7e-39
 Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 14/235 (5%)

Query: 29  LQPTDLNLYSAQRVGLVGCSGAGKSTLLKLLLALETADAGHIMCQGEEIRPAPVHRLRW- 87
           L    ++++  + V LVG SG+GK+TL + +  L     GHI  QG E          W 
Sbjct: 300 LHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVKESEGHIRFQGRE------RNEDWN 353

Query: 88  -YRRLVQYVPQDAHASLNPRHRVAELITAPLRQLGPRQDWGIAAERALRQVELDESLLYV 146
            YR   Q V QD ++SL+PR  +  L+   LR L P  D     +RAL  +E +  L   
Sbjct: 354 DYRLNCQMVFQDPYSSLDPRMTIQALVEEALR-LVPGLDQAAKRKRALETLE-EVGLGVD 411

Query: 147 RAG----QLSGGQAQRVALARAIALKPRFLLADEPVSGLDLPLRQQIIALLDQIARQQNM 202
            AG    +LSGGQ QRVA+ARAIA +PRFL+ADEPVS LD+ +R Q++ L   + ++   
Sbjct: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471

Query: 203 GMLLVSHDISLVAALCQRTLVMASGVIVEDRPTHELLHAPRHSATRRLIDAIPLL 257
             L +SHD+ +V  +  R +VM  G I+E+     +  +PR + TRRL+ AIP L
Sbjct: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPREAYTRRLLSAIPAL 526



 Score =  114 bits (285), Expect = 4e-30
 Identities = 75/242 (30%), Positives = 125/242 (51%), Gaps = 11/242 (4%)

Query: 24  SGAGGLQPTDLNLYSAQRVGLVGCSGAGKSTLLKLLLALE----TADAGHIMCQGEEIRP 79
           SG   ++    ++   +  G+VG SG+GK+   + L++L         G ++ +G+++  
Sbjct: 19  SGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAIAVTGGSVIYKGQDVMS 78

Query: 80  APVHRLRWYRRL-VQYVPQDAHASLNPRHRVAELITAPL---RQLGPRQDWGIAAERALR 135
            P   LR  R   +  V Q+   SLNP   +   +   L    +L P +      E  LR
Sbjct: 79  LPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKLSPEERREKILEM-LR 137

Query: 136 QVEL--DESLLYVRAGQLSGGQAQRVALARAIALKPRFLLADEPVSGLDLPLRQQIIALL 193
           +V +   E  L     + SGG  QR+ LA  + LKP  L+ADEP + LD  +++ ++ L+
Sbjct: 138 RVGIRDPEGALAAYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197

Query: 194 DQIARQQNMGMLLVSHDISLVAALCQRTLVMASGVIVEDRPTHELLHAPRHSATRRLIDA 253
            ++ R +   +LL+SHD+ +VA    R +VM  G IVE   T +LL APRH  T++L+ +
Sbjct: 198 VELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTEDLLDAPRHPYTKKLLSS 257

Query: 254 IP 255
           +P
Sbjct: 258 LP 259