Pairwise Alignments

Query, 269 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 9e-47
 Identities = 104/249 (41%), Positives = 149/249 (59%), Gaps = 6/249 (2%)

Query: 8   LLTVEHLTLSLNAEVKVHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLP-VGATVSG 66
           L+ +  L+++ + +  V +LS  +  GE L L+G SGSGKS+TA +IL  LP  G   +G
Sbjct: 3   LIEIRDLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTG 62

Query: 67  SIRLQGREVNGLR---LQRRKNTELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPLTKCQ 123
           SI+ +G+E+ G     LQ+ +   +A IFQ+P TSLNPL ++ +Q+   L     L    
Sbjct: 63  SIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKA 122

Query: 124 AQHCAAELLTALGMS-PDNVMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDM 182
           AQ    ELL  +G+  P   +  YP+QLSGGQ QR+  A+AL  E  LLIADEPTTALD+
Sbjct: 123 AQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDV 182

Query: 183 VSQHQLIDILKSYTERPSAPALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPP 242
             Q +++ +LKS  +R    +LL I+HDL +   + QR  V+  GEI EQ     L   P
Sbjct: 183 TVQRKILLLLKSLQKR-LGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAP 241

Query: 243 QHPYTQQLV 251
           QHPY++ L+
Sbjct: 242 QHPYSRLLL 250



 Score =  142 bits (358), Expect = 1e-38
 Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 8/236 (3%)

Query: 24  VHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGATVSGSIRLQGREVNGLRLQRR 83
           V  +S ++  G+ L ++G SGSGKS    AIL  L      +GSIR QG  ++ L  Q+ 
Sbjct: 293 VDGISLSVQRGKTLGIVGESGSGKSTLGQAILRLLDS----TGSIRFQGEALDPLNNQQM 348

Query: 84  K--NTELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPLTKCQAQHCAAELLTALGMSPDN 141
           +    ++  +FQDP+ SL+P  TV Q ++  L    P +         ++L  +G+ P +
Sbjct: 349 RPWRKQMQVVFQDPYGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPAS 408

Query: 142 VMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDMVSQHQLIDILKSYTERPSA 201
              RYP++ SGGQ QRI  A AL+ + +L++ DEPT+ALD   Q Q++ +L+   ++   
Sbjct: 409 -RHRYPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGL 467

Query: 202 PALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPPQHPYTQQLVASAQRP 257
              LFI+HDLAV   +    IV+ +G++ E+G+   +   PQHPYT++L+A+A  P
Sbjct: 468 -TYLFISHDLAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAAAHIP 522