Pairwise Alignments

Query, 269 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 531 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  173 bits (438), Expect = 8e-48
 Identities = 103/250 (41%), Positives = 151/250 (60%), Gaps = 6/250 (2%)

Query: 8   LLTVEHLTLSLNAEVKVHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGATVSGS 67
           LL V  L ++   +  VH ++F + AGE+L L+G SGSGK+++A ++L  L   A VSG 
Sbjct: 2   LLEVSDLRVAFGGQEVVHGINFAIRAGEKLALVGESGSGKTVSALSLL-RLVHNAEVSGR 60

Query: 68  IRLQGREVNGL---RLQRRKNTELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPLTKCQA 124
             LQGR++  L   +L+  +  E+A +FQ+P ++LNPL TVG Q+   L+ +  LT  QA
Sbjct: 61  ALLQGRDLLALSERQLRGVRGDEVAVVFQEPMSALNPLYTVGDQIREVLQLKKGLTARQA 120

Query: 125 QHCAAELLTALGM-SPDNVMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDMV 183
              + ELL + G+  P      +P+QLSGGQ QR   A+AL     LL+ADEPTTALD+ 
Sbjct: 121 VAASHELLASTGIPEPARRADAFPHQLSGGQRQRAMIAMALASAPKLLLADEPTTALDVS 180

Query: 184 SQHQLIDILKSYTERPSAPALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPPQ 243
            + Q++D+L    +R    A+L ITHDL +      R  V+  G + EQG  G +   P+
Sbjct: 181 LRVQILDLLAD-LQRQHGMAVLLITHDLNLVRRFADRIAVMERGHLVEQGGVGDVFAAPE 239

Query: 244 HPYTQQLVAS 253
           HPYT++L+AS
Sbjct: 240 HPYTRKLLAS 249



 Score =  131 bits (329), Expect = 3e-35
 Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 14/242 (5%)

Query: 22  VKVHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGATVSGSIRLQGREVNGLRLQ 81
           V V      +  G+ L ++G SGSGKS  A A LG LP      GS+++ G +    +  
Sbjct: 294 VAVKGADMAIAPGQTLGVIGESGSGKSTLALAALGLLPH----QGSLQIDGTDWAKAKKA 349

Query: 82  RRKNT---ELAAIFQDPFTSLNPLTTVGQQLTLALRSQNP-LTKCQAQHCAAELLTALGM 137
            R       +  +FQDPF+SL+P  TV Q +   L+   P L+  Q +      L  +G+
Sbjct: 350 GRGRALRQRIQVVFQDPFSSLSPRLTVEQIVGEGLQVHQPALSVAQRRERVVAALADVGL 409

Query: 138 SPD-----NVMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDMVSQHQLIDIL 192
             D     + + RYP++ SGGQ QR+  A AL+ +  LL+ DEPT+ALD+  Q Q++ +L
Sbjct: 410 VDDPERGGDWLQRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTVQKQVLSLL 469

Query: 193 KSYTERPSAPALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPPQHPYTQQLVA 252
           +   +R    + L ITHD+ V   +    +V+ +G + E G   R+L+ P+HPYT+ LV 
Sbjct: 470 QR-LQRERGLSYLLITHDVDVIHAMAHEVMVMKDGAVVESGPVDRVLRAPEHPYTRALVQ 528

Query: 253 SA 254
           +A
Sbjct: 529 AA 530