Pairwise Alignments

Query, 269 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 335 a.a., Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  165 bits (418), Expect = 1e-45
 Identities = 99/238 (41%), Positives = 137/238 (57%), Gaps = 7/238 (2%)

Query: 24  VHDLSFTLHAGERLCLLGASGSGKSLTAAAILGTLPVGATVSGSIRLQGREVNGLRLQRR 83
           V+DL+FTL AGE L ++G SGSGKS TA A++G L     + GS    GRE+  L  +R 
Sbjct: 37  VNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLP-ERE 95

Query: 84  KNT----ELAAIFQDPFTSLNPLTTVGQQLTLALRSQNPLTKCQAQHCAAELLTALGM-S 138
            NT    +++ IFQDP TSLNP   VG+QL   L     ++K +A   +  +L A+ M  
Sbjct: 96  LNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE 155

Query: 139 PDNVMTRYPNQLSGGQCQRICAALALLGEKSLLIADEPTTALDMVSQHQLIDILKSYTER 198
               M  YP++ SGG  QR+  A+ALL    LLIADEPTTALD+  Q Q++ +L    +R
Sbjct: 156 ARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNE-LKR 214

Query: 199 PSAPALLFITHDLAVAAGLCQRAIVLVNGEIAEQGSFGRLLQPPQHPYTQQLVASAQR 256
               A++ ITHDL V AG+C + +V+  G   E G    +   P HPY+  L+ +  R
Sbjct: 215 EFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNAVPR 272