Pairwise Alignments

Query, 321 a.a., peptide ABC transporter permease SapB from Serratia liquefaciens MT49

Subject, 338 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score =  178 bits (452), Expect = 1e-49
 Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 25/327 (7%)

Query: 12  LLITLFFLTLVSFSLSYFTPRAPLNGAA---------------------LLDAYQFYFVS 50
           L++ +F + +++F++S+  P  P    A                     L   +  Y + 
Sbjct: 14  LVLVMFGVCVITFTISHLIPGDPARLLAGDRASEEIVQHIRQQLGLDQPLYVQFGRYVLD 73

Query: 51  LLHWDFGVSSINGQAISEQLREVFPATMELCLLAFTLALFIGIPLGIIAGVMRGKWQDTA 110
           LLH D G S   G+ + + LR  FPAT+EL   A  LA+  G+PLG+++ V R KW D  
Sbjct: 74  LLHGDLGTSIRTGRPVLDDLRAFFPATLELASCALLLAIAFGVPLGVVSAVYRNKWPDHL 133

Query: 111 ISTFALLGFSMPVFWLALLLMLFFSLHLGWLPVSGRFD-LLYQVKPITGFALIDAWLSDS 169
           +   ++ G S P FWL L +++ F   L  LP  GR D  L     ITGF L+D+ L+ +
Sbjct: 134 VRLLSVTGISTPAFWLGLGVIILFYGQLNLLPGGGRLDDWLDPPTHITGFYLLDSLLTGN 193

Query: 170 PYRTEMIGSALRHMILPITALAVAPTTEVVRLMRISTDDVLNQNYIKAAATRGLSRFTII 229
               E   ++L+H+ILP   LA      V R +R +  + L ++YI+ A   GLS + ++
Sbjct: 194 G---EAFWNSLQHLILPALTLAFVHLGVVARQIRSAMLEQLGEDYIRTARANGLSHWRVV 250

Query: 230 RRHVLHNALPPIVPKLGLQFSTMLTLAMITEVVFSWPGLGRWMINAIRQQDYAAISAGVM 289
             H L NAL P V  LGL    +L  A++TE VF+WPG+G +++++I+  D+ A+    +
Sbjct: 251 LGHALPNALIPSVTVLGLALGDLLYGAVLTETVFAWPGMGAYVVDSIQALDFPAVMGFAV 310

Query: 290 VVGTLVITINVLADILGAATNPLKHKE 316
           VV    + +N++ D+L    +P   +E
Sbjct: 311 VVSFAYVMVNLIVDLLYLWIDPRMGRE 337