Pairwise Alignments

Query, 321 a.a., peptide ABC transporter permease SapB from Serratia liquefaciens MT49

Subject, 319 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Kangiella aquimarina DSM 16071

 Score =  237 bits (604), Expect = 3e-67
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 2/313 (0%)

Query: 1   MIIFTLRRFLLLLITLFFLTLVSFSLSYFTPRAP--LNGAALLDAYQFYFVSLLHWDFGV 58
           M    +R    LLI+LF LTL++F LS     A         +  Y  Y   LL  D+G 
Sbjct: 1   MFKLLIRHGTTLLISLFGLTLLTFVLSQRGDSALHIYQSQHFMGQYLEYLQYLLAGDWGY 60

Query: 59  SSINGQAISEQLREVFPATMELCLLAFTLALFIGIPLGIIAGVMRGKWQDTAISTFALLG 118
           SSI+ + +     + FPAT+EL +LA   A+  G+ LGI+A   RGKW D  +    L G
Sbjct: 61  SSIHNRPVLYDFLQHFPATIELVMLALLFAIIFGLTLGIMAANRRGKWLDNTLMGVTLAG 120

Query: 119 FSMPVFWLALLLMLFFSLHLGWLPVSGRFDLLYQVKPITGFALIDAWLSDSPYRTEMIGS 178
           +SMP++W  +LL+L FSL LGW PV+GR D +Y V P+T F LID+ LS   Y  +   +
Sbjct: 121 YSMPIYWWGMLLVLLFSLTLGWTPVAGRIDYIYDVPPVTRFMLIDSLLSQDQYGFDAFFN 180

Query: 179 ALRHMILPITALAVAPTTEVVRLMRISTDDVLNQNYIKAAATRGLSRFTIIRRHVLHNAL 238
           AL H+ILP   L+  P   + R+ R S   VL   YI+ A ++GLS+  II  H L NAL
Sbjct: 181 ALLHLILPAITLSTIPMAIIARMTRSSLLGVLKAEYIRTARSKGLSQQRIIWVHALRNAL 240

Query: 239 PPIVPKLGLQFSTMLTLAMITEVVFSWPGLGRWMINAIRQQDYAAISAGVMVVGTLVITI 298
            PI+   G+Q S +++  +ITE +F+WPG+G+W++ A+ ++D+A+I AG++ +  LVI  
Sbjct: 241 IPILTISGVQVSIIMSGVIITEYIFAWPGVGKWLLEAVSRRDFASIQAGILALSLLVIAF 300

Query: 299 NVLADILGAATNP 311
           N+  D+L +  NP
Sbjct: 301 NLALDLLASYMNP 313