Pairwise Alignments

Query, 370 a.a., sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC from Serratia liquefaciens MT49

Subject, 367 a.a., ABC transporter for D-Mannitol and D-Sorbitol, ATPase component (from data) from Pseudomonas simiae WCS417

 Score =  309 bits (791), Expect = 9e-89
 Identities = 179/364 (49%), Positives = 233/364 (64%), Gaps = 13/364 (3%)

Query: 1   MAGIQLNNVKKVYPNGFNALHGVDLDIKDGEFMVFVGPSGCAKSTLLRMIAGLESVSEGQ 60
           MA +++ N++K +  GF+ + G+DL++ D EF+VFVGPSGC KSTLLR+IAGLE VSEG 
Sbjct: 1   MANLKIKNLQKGF-EGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSEGT 59

Query: 61  ILIHDRCVNDTMPKDRGIAMVFQNYALYPHMTVYKNMAFGL-IGKESKAEIDRRVRDAAE 119
           I +  R + +  P  R +AMVFQ YALYPHM+V KNM+F L +    K  ++ +V +AA 
Sbjct: 60  IELDGRDITEVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKKLVESKVSEAAR 119

Query: 120 KLEITNLLQRKPGQLSGGQCQRVAVGRAIVRKPKVFLFDEPLSNLDAKLRVSMRVQLIEL 179
            LE+  LL+RKP QLSGGQ QRVA+GRAIVR PK+FLFDEPLSNLDA LRV MR++L  L
Sbjct: 120 ILELGPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARL 179

Query: 180 HNQLKQEGAAATMVYVTHDQVEAMTMGDRICVMNRGAIMQVDKPINLYHQPANRFVAEFI 239
           H +L+     ATM+YVTHDQVEAMT+ D++ V+N G I QV  P+ LYHQPAN FVA F+
Sbjct: 180 HKELQ-----ATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFL 234

Query: 240 GSPSMNLHDMAVTR-STQGIGLRIGNEYPLELPPALQQQLESYPHPRVCLGIRPESLRLC 298
           G+P M      VTR  +Q   +++     + LP  L     S     V LGIRPE L + 
Sbjct: 235 GTPKMGFLKGKVTRVESQSCEVQLDAGTLINLP--LSGATLSV-GSAVTLGIRPEHLEIA 291

Query: 299 APGSSNCFPAKIVTIERMGNEELLHCELAELRFVLRMASQPDWEPRLGEQIHLAFDLTRA 358
           +PG +       V  ER+G++   H   A     L M  + D   + GE +HL  D    
Sbjct: 292 SPGQTTLTVTADVG-ERLGSDTFCHVITANGE-PLTMRIRGDMASQYGETLHLHLDPAHC 349

Query: 359 HLFD 362
           HLFD
Sbjct: 350 HLFD 353