Pairwise Alignments

Query, 370 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  241 bits (616), Expect = 2e-68
 Identities = 148/331 (44%), Positives = 201/331 (60%), Gaps = 49/331 (14%)

Query: 41  YWVRVIDFALLYLMLALGLNIVVGLTGLLDMGFIAFYAVGAYLTALLSSPHLTEQFPILL 100
           Y + V+   L+Y++L LGLNIVVGL GLLD+G++AFYA+GAY  AL        Q+    
Sbjct: 116 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL------GYQY---- 165

Query: 101 QWFPDGLHLSILLLIPLAAILAALCGILLGAPTLRLRGDYLAIVTLGFGEIVRILMRNLD 160
                 L L    ++PLAAI AAL G +LG P LR+ GDYLAIVTLGFGEI+R+++ N  
Sbjct: 166 ------LGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNW- 218

Query: 161 RPLNITNGPKGISGIDPVSLFGLKFSG--------MHQWFGFRFSS----LYLYYYLFAA 208
             L+ T GP G+    P  L GL+F           H++FG  ++     L++Y  LF  
Sbjct: 219 --LSFTGGPNGMPVPSPTFL-GLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFL- 274

Query: 209 LLLLILFICLRLQHSRVGRAWTAIREDEDAARAMGINTRNFKLLAFAIGATFGGIAGALF 268
           ++L +L+I  RL    VGRAW A+REDE A R+MG+N    KL AF IGA+  G+AG  F
Sbjct: 275 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFF 334

Query: 269 AAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVILGALLLAALPELLRSTMGPLQQAL 328
           A++QGFV+P SFT  ES  +LA+VVLGGMG   GV++ A +L   PELLRS         
Sbjct: 335 ASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRS--------- 385

Query: 329 FGQVWIDPEIIRQLFYGLALILVMLYRPAGL 359
           F +        R L +G+ ++++M++RP GL
Sbjct: 386 FSE-------YRVLLFGVLMVVMMIWRPRGL 409