Pairwise Alignments

Query, 316 a.a., branched-chain amino acid ABC transporter permease from Serratia liquefaciens MT49

Subject, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  362 bits (930), Expect = e-105
 Identities = 184/316 (58%), Positives = 238/316 (75%), Gaps = 7/316 (2%)

Query: 1   MDTLVQQTVNGLMLGSIYALIALGYTMVYGILRIINFAHGDVLMVGALSALSAIGVLQHH 60
           M+ L+QQ +NGL+LGS+YAL+ALGYTMVYGI+ +INFAHGDVLMVGAL++ + IG + + 
Sbjct: 1   MEVLLQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIGWMMNA 60

Query: 61  FPTLSPYVTLLLAALIAMAVCSLVSMSIERLAYRRLRNAPRLAPLISGIGVSLLLQTLAM 120
              L  ++ L LA +IAM VC+ ++ +IE+LAYR LRN+ RLAPLI+ IG+SLLLQT AM
Sbjct: 61  STGLPTWLILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAM 120

Query: 121 LIWSRNPLMFPQLLPMEPIALTSGSANHAPAVITGTGIATLAIALLVMAGLLLLVEHSRF 180
           +IW+ NP  +P +L  EPIA+         AV++ T +  LA   + +A L+ LV  +  
Sbjct: 121 IIWAPNPKSYPSMLSREPIAIGG-------AVVSVTQVVILATTAVTLAFLMWLVNRTNL 173

Query: 181 GRAMRATAENPQVAGLMGIEPNRIIVLTFALGGALAAVAGIMMASNYGNAGFSMGFLPGI 240
           GRAMRATAENP+VA LMGI+P+ +I  TF +G  LAA+AG+M ASNYG    +MGF+PG+
Sbjct: 174 GRAMRATAENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGL 233

Query: 241 KAFTAAVLGGIGNLRGAMLGGLLLGLFESLGTGYLGELTGGTFGSNYQDVFAFLILIAVL 300
           KAF AAV+GGIGNL GA++GG+ LGL ESLG GYLG+LTGG  GS Y D+FAF++L  VL
Sbjct: 234 KAFVAAVMGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVL 293

Query: 301 VFRPSGLLGERVATRA 316
             RPSGLLGERVA RA
Sbjct: 294 TLRPSGLLGERVADRA 309