Pairwise Alignments

Query, 512 a.a., long-chain fatty acid--CoA ligase from Serratia liquefaciens MT49

Subject, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  258 bits (659), Expect = 4e-73
 Identities = 182/543 (33%), Positives = 277/543 (51%), Gaps = 45/543 (8%)

Query: 3   NLSTLLEESARTFPDRLALVQDEFQLSYGELDQLANQVAHLLRIRGVKPGERVALACPNR 62
           +L  L+EES   + DR A       +SYGE D+ +   A  L+  G+  G+RVA   PN 
Sbjct: 25  SLVALMEESFSKYADRTAYSFMGKDISYGETDKQSKAFAAYLQGLGLVKGDRVAAMMPNC 84

Query: 63  WEFPAIYFGILKAGAVVVPLNILLKAGEFEYYLQDSQAVAFFCFEGGHGLTLGEEAKIAF 122
            ++P     IL+AG ++V +N L    E E+ L+DS A A    E   G TL +      
Sbjct: 85  PQYPIAVAAILRAGLILVNVNPLYTPRELEHQLKDSGAKAIIIMEN-FGTTLQQCI---- 139

Query: 123 DATQSCRDFII--IGDSLP-LSGDRFSQAIRQ-----------------QPTDFDSASTL 162
            A+   +  ++  +GD L  L G   +  +R                     D  ++ ++
Sbjct: 140 -ASTPIKHIVLASMGDRLGFLKGALVNYVVRNVKKLVPHFSLPGAVRFNDALDKGASGSV 198

Query: 163 E------SDTAVILYTSGTTGRAKGAELTHSNLVLNALVSAQLFNSSVERPDRH-----L 211
           +       D AV+ YT GTTG +KGA L H N++ N L S      ++ +   +     +
Sbjct: 199 KPVAIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEAWNEPAMAKVPANEQPTGV 258

Query: 212 VTLPLFHTFGSTVQMNAGFALGATLVLMPR-FDAKLAISLMQKHAITFFAGVPTMYWALL 270
             LPL+H F  TV M      G  L+L+P   D    +  + KH I  F  V T++  L 
Sbjct: 259 CALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELSKHTIHSFPAVNTLFNGLA 318

Query: 271 NALDDSVDLAMLRKNLRMAVSGGASLPVQIIEDFARRFGVNILEGYGLSETSPVATFNHP 330
           N  D +    +  KNL+++V GG ++   + + +  + G  I EGYGLSETSP  T N  
Sbjct: 319 NHPDFNT---VNWKNLKISVGGGMAVQAAVAKLWLEKTGCPICEGYGLSETSPSTTCNPT 375

Query: 331 GRVNKVGSIGQPIWGVEVRLVDVTGKTITEIDQVGELAVRGHNVMKGYLNRPEATAEVLE 390
                 G+IG P+ G  ++L+D  G  +  + + GE+A++G  VM GY  RP+ TA+V+ 
Sbjct: 376 NSTAYTGTIGLPLPGTWLKLLDDEGNEVP-LGERGEIAIKGPQVMAGYWQRPDETAKVMT 434

Query: 391 -NGWFRTGDLARRDADGVYFIVDRSKDVIIRGGFNVYPREVEELMIRHPAVSLVAVIGVP 449
            +G+F++GD+   D  G + +VDR KD+I+  GFNVYP EVE+++   P V   A +GVP
Sbjct: 435 PDGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYPNEVEDVVALIPGVLECAAVGVP 494

Query: 450 HPSLGEEIKAVVVLKDLDEAVTEEALITWTKERLAAFKYPRIVEFVERLPMTSTGKVLKR 509
               GE +K V+V K  D ++TE  +  + +  L  +K PRIVEF   +P T  GK+L+R
Sbjct: 495 DEKTGEAVKLVIVKK--DPSLTEAQVREYCRANLTGYKQPRIVEFRTEMPKTPVGKILRR 552

Query: 510 LLR 512
            LR
Sbjct: 553 ELR 555