Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  228 bits (581), Expect = 1e-64
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 9/257 (3%)

Query: 9   LTSLALGGPAAAQAFDTIS--------FGVDGGYPPFDVLAPNGEITGFDIDIANALCTQ 60
           +  LAL G  A   F  +S         G++  YPPF    P+G I GFD DI NALC +
Sbjct: 1   MKKLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60

Query: 61  LHAKCVFVKQPFESMIAALNAHKFDAIIASLTITDERKKEVDFTDRYYRSSAQLVARKGS 120
           +  KC +V+Q F+ +I AL   K DAI++S++ITD+RKK VDFT RYY + A+LV + G+
Sbjct: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120

Query: 121 ALLPDVASLKGKTVGVQTGSIHEAYAKQHWGGKGVKIVSYANQDNVYLDLMSGRINASLQ 180
            +   +  LKGK +GVQ GSIH+ +AK+  G KG  +V Y  Q+ +YLD+ +GR++ ++ 
Sbjct: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180

Query: 181 DNTQAASSFIDTPRGQKFAFAGPVIEDSSISSD-VGIAVGKDNPALRDALNGAIKAIRAD 239
           D T     F+ T  G+ FAF GP   D+    D +GIAV K + A  D +N AI AIRA+
Sbjct: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240

Query: 240 GTYEAIQKKYFSFDIYG 256
           G Y+ I+ KYF+FDIYG
Sbjct: 241 GKYKEIESKYFNFDIYG 257