Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 277 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  219 bits (559), Expect = 4e-62
 Identities = 114/245 (46%), Positives = 158/245 (64%), Gaps = 5/245 (2%)

Query: 17  PAAAQA---FDTISFGVDGGYPPFDVLAPNGEITGFDIDIANALCTQLHAKCVFVKQPFE 73
           PAAA A      +   +D  Y PF     +G+ TGFD+DIA+ALC Q+  KCV+V+Q ++
Sbjct: 34  PAAAPAPAEMPELKVAIDPTYEPFTFKTADGKPTGFDVDIADALCAQIKRKCVYVEQVWD 93

Query: 74  SMIAALNAHKFDAIIASLTITDERKKEVDFTDRYYRSSAQLVARKGSALLPDVASLKGKT 133
           SMI  L A K+DAII+S++IT+ER + VDFTD+YY + +++V + G+A   D ASLKGK 
Sbjct: 94  SMIPGLQAKKYDAIISSMSITEERLQVVDFTDKYYFTPSRIVVKTGTA-YTDPASLKGKK 152

Query: 134 VGVQTGSIHEAYAKQHWGGKGVKIVSYANQDNVYLDLMSGRINASLQDNTQAASSFIDTP 193
           +GV  GS  E YA       GV IV Y  QD VYLD+ SGR++ ++ D  +    F+  P
Sbjct: 153 IGVLKGSTQEKYAMGELKPAGVSIVPYEAQDQVYLDIKSGRLDGTVADQVEVNGGFLRKP 212

Query: 194 RGQKFAFAGPVIEDSS-ISSDVGIAVGKDNPALRDALNGAIKAIRADGTYEAIQKKYFSF 252
            G  + F GPV+ ++    + VG+A+ K   AL+D LN AIKAIR++G YE + KKYF F
Sbjct: 213 EGAGYGFVGPVLNEAKYYGTGVGVALRKGETALKDELNAAIKAIRSNGVYETVAKKYFDF 272

Query: 253 DIYGN 257
           D+YGN
Sbjct: 273 DVYGN 277