Pairwise Alignments

Query, 257 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 260 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  233 bits (595), Expect = 2e-66
 Identities = 115/260 (44%), Positives = 169/260 (65%), Gaps = 3/260 (1%)

Query: 1   MKKTLAVLLTSLALGGPAAAQAF--DTISFGVDGGYPPFDVLAPNGEITGFDIDIANALC 58
           MKKT+  L   + LG  AA+ A    T+  G D  Y PF      GE  GFDID+ N +C
Sbjct: 1   MKKTVLALSLLIGLGATAASYAALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMC 60

Query: 59  TQLHAKCVFVKQPFESMIAALNAHKFDAIIASLTITDERKKEVDFTDRYYRSSAQLVARK 118
            ++  KC +V   F+++I +L A K DAII+SL+ITD+R++E+ F+D+ Y + ++L+A K
Sbjct: 61  KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120

Query: 119 GSALLPDVASLKGKTVGVQTGSIHEAYAKQHWGGKGVKIVSYANQDNVYLDLMSGRINAS 178
           GS + P + SLKGK VGV  GS  EAYA  +W  KGV +V+YANQD +Y DL +GR++A+
Sbjct: 121 GSPIQPTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAA 180

Query: 179 LQDNTQAASSFIDTPRGQKFAFAGPVIEDSSISSD-VGIAVGKDNPALRDALNGAIKAIR 237
           LQD   A+  F+  P G+++AFAGP ++D     D  G+ + KD+  L+ A + A+  +R
Sbjct: 181 LQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELR 240

Query: 238 ADGTYEAIQKKYFSFDIYGN 257
            DGTY+ + KKYF F++YG+
Sbjct: 241 QDGTYDKMAKKYFDFNVYGD 260