Pairwise Alignments

Query, 357 a.a., sugar ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 14/224 (6%)

Query: 78  GDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALLKRIADSGIAVAAFDTAVQGEIPGVT 137
           G     ++F+NQ +    D I+++ G       +  +     I V A D  V  +     
Sbjct: 74  GQIGHIRNFMNQGV----DAILINPGSPTAFDPIFAQAKARNILVIATDAEVSSK--DAL 127

Query: 138 ITQQDDASLTDLSFGQLVKDFNGQANIIKL-WVAGFPPMERRQAQYQKLLKQQPGIKELE 196
               D  +    S   L     G+ +++ +  +AG P  E R A Y+++ K+ P IK L 
Sbjct: 128 YVGIDQKAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDIKVLN 187

Query: 197 SIGAVSSDVQGDTANKIGAILAKYPKGKIDAIWGTWDAFSQGAYKALQENGRTEIKLYSI 256
              A     QG  A  +  +LA YP   I  +W   D  + GA++A++  G+T+    + 
Sbjct: 188 EANASWDQAQGQQA--MQNLLATYP--DISGVW-VQDGMADGAWRAIEAAGKTKDIAATG 242

Query: 257 DISNQDLALMRAKDSAWKLSVAVDPKLIGAVNLRLVANKIGGEK 300
           +I      + R +   +    +V+P  + A  L +   K+ G++
Sbjct: 243 EIRKD--FMTRWEKEKFNSGASVNPPGVMASALNVAVLKLQGKE 284