Pairwise Alignments

Query, 301 a.a., DMT family transporter from Serratia liquefaciens MT49

Subject, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 24/264 (9%)

Query: 1   MNVLLYLAVVLIWGTTWIAITLQQEGPVAIPVSISYRFVVSAVVMLVILLLAR------- 53
           ++ L  L +  IWG +++ + +       +P +  +R  ++A  +LVIL + R       
Sbjct: 4   VDTLYLLGLAAIWGASFLFMRIIAPEIGTVPTAF-FRVSIAAAGLLVILAMMRVSWDFQG 62

Query: 54  RLRRIALRDHLFCVLQGCCVFGFNFYCFYHAAAYISSGLESVIFSMAVLFNAVNGIIFFR 113
           + R +        +L G    G     +  AA  + +G  ++  +   L   + G +FF 
Sbjct: 63  KFRTV--------LLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFS 114

Query: 114 QRPSPNLLPAAVLGLTGIVALFWQDLVATQMAPDLLKGIGLSALGTYGFSLGNMISSR-- 171
           +R +P+ +    LGL G+  L     VA  +  +LL G     L T  +     ++ R  
Sbjct: 115 ERLTPSKIAGVCLGLFGVGVLTRAGPVAFDL--ELLTGALACLLATTCYGFAGFLARRWL 172

Query: 172 HQRHGLDILSTNTYAMSYGAILMALIALAQGASFQIEFS---TRYIGSLLYLAIFGSVIA 228
            QR GLD   +   +M  GA L  L   A  A  Q   S    +  GSLL L +  +  A
Sbjct: 173 DQRGGLDSRLSALGSM-LGATLFLLPFFAYSAISQPPASWGGWQVWGSLLGLGLVCTAFA 231

Query: 229 FAAYFSLLGRIGAGAAAYSTLLFP 252
           +  YF LL  IG   +   T + P
Sbjct: 232 YILYFRLLTSIGPVKSMTVTFMIP 255



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)

Query: 147 DLLKGIGLSALGTYGFSLGNMISSRHQRHGLDILSTNTYAMSYGA--ILMALIALAQGAS 204
           D L  +GL+A+    F    +I+       +  + T  + +S  A  +L+ L  +     
Sbjct: 5   DTLYLLGLAAIWGASFLFMRIIAPE-----IGTVPTAFFRVSIAAAGLLVILAMMRVSWD 59

Query: 205 FQIEFSTRYIGSLLYLAIFGSVIAFAAYFSLLGRIGAGAAAYSTLLFPLVALTISTLYEG 264
           FQ +F T     +L L +  S I    Y      + AG +A      PL+ + I  L+  
Sbjct: 60  FQGKFRT-----VLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFS 114

Query: 265 YQWHTNAVIGLCLILLG 281
            +   + + G+CL L G
Sbjct: 115 ERLTPSKIAGVCLGLFG 131