Pairwise Alignments

Query, 426 a.a., voltage-gated ClC-type chloride channel ClcB from Serratia liquefaciens MT49

Subject, 577 a.a., ClcB-like voltage-gated chloride channel protein from Paraburkholderia sabiae LMG 24235

 Score =  298 bits (762), Expect = 4e-85
 Identities = 185/424 (43%), Positives = 249/424 (58%), Gaps = 9/424 (2%)

Query: 3   RWVHLHHYRALLRRLFIAIFLGIAAALVVWLFHRAMLGLEWLLLDHESGSLVAAASALPA 62
           R  HL         L  ++ +GIA A     F R  + L   +   + GSLV  A  LP 
Sbjct: 11  RAAHLFRLSDAHTMLVWSVIVGIAGAFATIAF-REGISLLQRVFTGQDGSLVEMARRLPL 69

Query: 63  WRRALTPALGGLAAGTLLWVYQRYQHQRQIAPTDYMEAIETGDGRLDVSASLVKCLASLL 122
             R   PA GGL AG LL V QR   ++    TDYMEA+  GDG + V  SL + ++SL 
Sbjct: 70  AMRIGLPAFGGLIAGLLLLVAQRGVDRK--LHTDYMEAVVIGDGVVPVRVSLWRSVSSLF 127

Query: 123 VVSSGSAIGREGAMILLAALVGSVFAQRFTH--EKEWKLWVACAAAAGMASAYHAPLAGS 180
            +SSG +IGREG M+ LAAL  S+   R  H      +L VAC AAAG+ SAY AP+AG+
Sbjct: 128 TISSGGSIGREGPMVQLAALGASLIG-RVVHFDPPRLRLLVACGAAAGITSAYSAPIAGA 186

Query: 181 LFIAEILFGTLMLASLGPVVIAAVCALLMTNLLNGGQAPLYLVEPLPAPWPVQYLLMALL 240
            F+ EI+ G++ + S GPVV+++V A ++     G + P Y +   P    ++ LL   L
Sbjct: 187 FFVTEIVLGSIAMESFGPVVVSSVVANIVMREFAGYKPP-YEMPVFPPVAGLEVLLFVAL 245

Query: 241 GVLAGICGPLFLWAMQATGHAFRSLRLKPPLQLALGGLIVGLLSLLFPEVWGNGYSVVQS 300
           G+L G   P FL  +  +  AF  LR+  PL+LALGGLIVG+LS+  PEVWGNGYSVV S
Sbjct: 246 GLLCGTAAPQFLRLIDTSKSAFGRLRVPLPLRLALGGLIVGILSIWTPEVWGNGYSVVNS 305

Query: 301 LLSAPPGVLLVGAILICKLLAVLASSGSGAPGGVFTPTLFVGAALGSVIG-QLCATWPEL 359
           +L +P     +  +L+ KL+A  A+ GSGA GGVFTPTLFVGA +GS+ G  + A WP  
Sbjct: 306 ILHSPWTWTALVVVLVFKLIATAATVGSGAVGGVFTPTLFVGAVIGSLFGIGMNALWPHA 365

Query: 360 GSAVPLLMALTGMATLLAATTHAPIMAALMVFEMTGEYTLLPGILLACVIATTVSRGLRS 419
            SA P   A+ GM   LA  T AP+MA LM+FEMT  Y ++  ++L+CV+A   +R +  
Sbjct: 366 TSA-PFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFAARAIGK 424

Query: 420 VSVY 423
            S+Y
Sbjct: 425 TSMY 428