Pairwise Alignments

Query, 426 a.a., voltage-gated ClC-type chloride channel ClcB from Serratia liquefaciens MT49

Subject, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

 Score =  130 bits (328), Expect = 7e-35
 Identities = 128/440 (29%), Positives = 199/440 (45%), Gaps = 44/440 (10%)

Query: 11  RALLRR-------LFIAIFLGIAAALVVWLFHRAMLGLEWLLLDHESGSLVAAASALPAW 63
           R LLRR       LF+A  +G  A L+   F +A+   +W+     S     A   +  W
Sbjct: 23  RQLLRRDKTPVAILFMAALVGTMAGLLGVAFDKAV---DWVQQQRFSALAQVADYWILVW 79

Query: 64  RRA--LTPALGGLAAGTLLWVYQRYQHQRQIAPTDYMEAIETGDGRLDVSASL------- 114
             A  L+ AL  L           Y   R+ AP      I   +G L+    +       
Sbjct: 80  PLAFILSAALAMLG----------YYLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVIP 129

Query: 115 VKCLASLLVVSSGSAIGREGAMILLAALVG----SVFAQRFTHEKEWKLWVACAAAAGMA 170
           VK +  +  + +G  +GREG  + +   VG     +F  R    +   L  A  AAAG++
Sbjct: 130 VKFIGGMGTLGAGMVLGREGPTVQMGGNVGRMVLDIFRMRGAEARHSLL--ATGAAAGLS 187

Query: 171 SAYHAPLAGSLFIAEILFGTLM--LASLGPVVIAAVCALLMTNLLNGGQAPLYLVEPLPA 228
           +A++APLAG LFI E +       L S+  V I  + + ++  L NG  + + + +   A
Sbjct: 188 AAFNAPLAGILFIIEEMRPQFRYNLISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSA 247

Query: 229 PWPVQYLLMALLGVLAGICGPLFLWAMQATGHAFRSLRL-KPPLQLALGGL---IVGLLS 284
           P    +L + +LG + G  G +F   +  T   F  L   K    L +GGL   I G+L 
Sbjct: 248 PINTLWLYL-VLGAIFGAVGVMFNALVFRTQDMFARLHGGKMRKILLMGGLLGGICGILG 306

Query: 285 LLFPEVWGNGYSVVQSLLSAPPGVLLVGAILICKLLAVLASSGSGAPGGVFTPTLFVGAA 344
           L+ PE  G G+ ++    +    V ++  I I +++  L   GSGAPGG+F P L +G  
Sbjct: 307 LIQPEAAGGGFGLIPIAAAGNYSVGMLMFIFITRVITTLLCFGSGAPGGIFAPMLALGTL 366

Query: 345 LGSVIGQLCA-TWPELGSAVPLLMALTGMATLLAATTHAPIMAALMVFEMTGEYTLLPGI 403
            G+  G      +PE G       A+ GM  L AAT  AP+   ++V EMT  Y L+  +
Sbjct: 367 FGTAFGLAGGHLFPEYGIEAG-TFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPM 425

Query: 404 LLACVIATTVSRGLRSVSVY 423
           ++ C+ AT V++ L    +Y
Sbjct: 426 IITCLGATLVAQFLGGKPLY 445