Pairwise Alignments

Query, 426 a.a., voltage-gated ClC-type chloride channel ClcB from Serratia liquefaciens MT49

Subject, 591 a.a., Chloride channel protein EriC from Kangiella aquimarina DSM 16071

 Score =  147 bits (370), Expect = 1e-39
 Identities = 102/352 (28%), Positives = 169/352 (48%), Gaps = 9/352 (2%)

Query: 65  RALTPALGGLAAGTLLWVYQRYQHQRQIAPTDYMEAIETGDGRLDVSASLVKCLASLLVV 124
           R L P +GGL  G LL   Q     RQ+  +  +E +    G L    + V+     L +
Sbjct: 67  RLLLPTIGGLIVGILL--QQLKPENRQVGVSHVLERMAYHQGHLPPKNAFVQFALGGLTI 124

Query: 125 SSGSAIGREGAMILLAALVGSVFAQRFT-HEKEWKLWVACAAAAGMASAYHAPLAGSLFI 183
           +SG ++GREG  I L +   S   Q+        ++ V C  AA +++ ++ PLAG +F 
Sbjct: 125 ASGQSVGREGPGIHLGSASASWVGQKLKLPNNSTRILVGCGCAAAISANFNTPLAGVIFA 184

Query: 184 AEILFGTLMLASLGPVVIAAVCALLMTNLLNGGQAPLYLVEPLPAP--WPVQYLLMALLG 241
            EI+     +AS  P+++A+V   ++T L+ G  A   +   L     W + Y L  L+G
Sbjct: 185 MEIIIMEYAVASFIPIILASVAGAILTRLVFGDGASFDVPSKLDIQSLWEMPYFL--LVG 242

Query: 242 VLAGICGPLFLWAMQATGHAFRSLRLKPPLQLALGGLIVGLLSLLFPEVWGNGYSVVQSL 301
              G+   +F+ A +      R   +   L+  + G  VG++++  P+V G GY  V S 
Sbjct: 243 FAGGVLASIFIIATRKVRQVSREWPVW--LKTTVAGTSVGIIAIGIPQVMGIGYDSVNSA 300

Query: 302 LSAPPGVLLVGAILICKLLAVLASSGSGAPGGVFTPTLFVGAALGSVIGQLCATWPELGS 361
           L     + ++   L+ KL+A +  SG   PGGV  P LF+GA LG V+G +        +
Sbjct: 301 LQGELALTILVLALVGKLIATIICSGLSLPGGVIGPALFLGAMLGGVMGNVGGELFPDHA 360

Query: 362 AVPLLMALTGMATLLAATTHAPIMAALMVFEMTGEYTLLPGILLACVIATTV 413
           +     A+ GMAT++ A   AP+ A + + E+T    ++   + + VI   V
Sbjct: 361 SYTGFYAMIGMATVMGAVLQAPLAALMALLELTNNPNIIFPGMFSIVIGNLV 412