Pairwise Alignments

Query, 426 a.a., voltage-gated ClC-type chloride channel ClcB from Serratia liquefaciens MT49

Subject, 473 a.a., H(+)/Cl(-) exchange transporter ClcA from Escherichia coli ECRC101

 Score =  120 bits (300), Expect = 1e-31
 Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 29/415 (6%)

Query: 17  LFIAIFLGIAAALVVWLFHRAMLGLEWLLLDHESGSLVAAASALPAWRRALTPALGGLAA 76
           LF+A  +G    L    F +   G+ WL  +   G+LV  A   P     LT A   L +
Sbjct: 36  LFMAAVVGTLVGLAAVAFDK---GVAWLQ-NQRMGALVHTADNYPL---LLTVAF--LCS 86

Query: 77  GTLLWVYQRYQHQRQIAPTDYMEAIETGDGRLDVSASL-------VKCLASLLVVSSGSA 129
             L      Y   R+ AP      I   +G L+    +       VK    L  +  G  
Sbjct: 87  AVLAMF--GYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMV 144

Query: 130 IGREGAMILLAALVGSVFAQ--RFTHEKEWKLWVACAAAAGMASAYHAPLAGSLFIAEIL 187
           +GREG  + +   +G +     R   ++     +A  AAAG+A+A++APLAG LFI E +
Sbjct: 145 LGREGPTVQIGGNIGRMVLDVFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEM 204

Query: 188 FGTLM--LASLGPVVIAAVCALLMTNLLNGGQAPLYLVEPLPAPWPVQYLLMALLGVLAG 245
                  L S+  V I  + + +M  + N   A + + +   AP    +L + +LG++ G
Sbjct: 205 RPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYL-ILGIIFG 263

Query: 246 ICGPLF---LWAMQATGHAFRSLRLKPPLQL--ALGGLIVGLLSLLFPEVWGNGYSVVQS 300
           I GP+F   +  MQ   H      +   + +  A+GGL  GLL  + P   G G++++  
Sbjct: 264 IFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLC-GLLGFVAPATSGGGFNLIPI 322

Query: 301 LLSAPPGVLLVGAILICKLLAVLASSGSGAPGGVFTPTLFVGAALGSVIGQLCATWPELG 360
             +    + ++  I + +++  L    SGAPGG+F P L +G  LG+  G +        
Sbjct: 323 ATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQY 382

Query: 361 SAVPLLMALTGMATLLAATTHAPIMAALMVFEMTGEYTLLPGILLACVIATTVSR 415
                  A+ GM  LLAA+  AP+   ++V EMT  Y L+  +++  + AT +++
Sbjct: 383 HLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQ 437