Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 2e-44
 Identities = 113/289 (39%), Positives = 152/289 (52%), Gaps = 10/289 (3%)

Query: 6   PLNALRAFESSARHLNFTRAGLELSVTQAAVSQQVRTLEQQLGIQLFRRLPRGLDLTEEG 65
           PLN LRAFE SAR+LNFT A  EL +TQ AVSQQ+R LE QLG+ LF+RLPRGL LTEEG
Sbjct: 8   PLNWLRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRGLGLTEEG 67

Query: 66  QALLPILTDAFDRIESVLQQFEGGHFHEVLTVAVVGTFAVGWLMPRLAAFRASHPFIDLR 125
           Q+ LP++ DA  R+     +  G      L V    +F   WL PRLA FR SHP +D+R
Sbjct: 68  QSYLPVVQDAISRLAVGTNEIFGQRQRRPLKVRGSLSFLHFWLAPRLADFRRSHPQVDIR 127

Query: 126 VLTNNNLVNLSADGMDFAIRFGEGRWPATHNLKLFDAPLTVLCPPEIAQ--RLRTPQDLQ 183
            ++N  +  L A+  D  IR+G G+W      +L    L  +C P +     LR P+DL 
Sbjct: 128 YISNLWVKELDAED-DLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAGCPLREPRDLA 186

Query: 184 YELLMRSYRKDE-WERWFT---AAQVTPWRINGPVFDSSRLMVEGAIHSGGVALAPARMF 239
              L+     +E W  W     A QV     +G  FD+    +  A    GVALA + + 
Sbjct: 187 RVPLLHVLGYEEGWGYWLERVGADQVD--SSSGLQFDTLVSTLRMAELGLGVALARSSLV 244

Query: 240 ARELREGILQRPFAAEANLG-AYWLTHLKSRDMTPAMKVFVGWIQQQAN 287
              L+EG L  PFA       +++L       ++P  + F  W+   A+
Sbjct: 245 EDLLQEGRLVAPFAQRIEASESFFLVRGLGEALSPDAQAFSHWLVAMAH 293