Pairwise Alignments

Query, 361 a.a., electron transport complex subunit RsxD from Serratia liquefaciens MT49

Subject, 413 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Serratia liquefaciens MT49

 Score =  124 bits (310), Expect = 6e-33
 Identities = 87/283 (30%), Positives = 126/283 (44%), Gaps = 45/283 (15%)

Query: 80  VRTRLADNSALLTALLLGISLPPLAPWWMIVIGTFFAIVIAKQLYGGLGQNPFNPAMVGY 139
           +R    +    +T++L  + +PP  P W   +G  F +V+AK+++GG G+N  NPA+ G 
Sbjct: 150 IRKHEINEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEIFGGTGRNFLNPALAGR 209

Query: 140 VVLLIAFPVQMTSWLPPDELRATALSFQDTLLAIFSGHTAQGATIHELQMGIDGISQATP 199
             L  A+P Q++  L                                +    DG S ATP
Sbjct: 210 AFLFFAYPAQISGDL--------------------------------VWTSADGFSGATP 237

Query: 200 LDGFKTGLRSGHSVEQVLQ------QPLFGGALAGIGWQWVNLGFLAGGLFMLARRLIHW 253
           L  +  G    HS+  V           F G + G   +   L  L GG  +L  R+  W
Sbjct: 238 LAQWSAG--GAHSLSNVATGQSISWMDAFLGNIPGSVGEVSTLMILLGGAIILFGRVASW 295

Query: 254 QI----PFSMLAAIAVCSGLAWWLDPLQQASPLIHLFSGASMLGAFFIATDPVSASTTPK 309
           +I       M+A   + + +    +PL       HL  G    G  F+ATDPVSAS T K
Sbjct: 296 RIVAGVMLGMMATAFLFNSIGSTTNPLFAMPWYWHLVLGGFAFGMIFMATDPVSASFTNK 355

Query: 310 GRLIYGALIGVLVWLIRVYG-GYPDGVAFAVLLANITVPLIDH 351
           G+  YG LIGV+  LIRV    YP+G+  A+L AN+  PL D+
Sbjct: 356 GKWWYGILIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDY 398