Pairwise Alignments

Query, 337 a.a., L,D-transpeptidase family protein from Serratia liquefaciens MT49

Subject, 310 a.a., L,D-transpeptidase linking Lpp to murein from Escherichia coli BL21

 Score =  308 bits (790), Expect = 9e-89
 Identities = 160/297 (53%), Positives = 207/297 (69%), Gaps = 7/297 (2%)

Query: 15  VLTGTQAASASEYPLPPPDSRLIGENTTYTVPNDG-RPLEAIAADYKIGLLGMLEANPGT 73
           +L  +  + A  YPLPP  SRL+G++ T TVP+   +PLE  AA Y  GL  MLEANPG 
Sbjct: 12  LLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGA 71

Query: 74  DPFLPKPGSVLTIPTQMLLPDTKREGIVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHT 133
           D FLPK GS LTIP Q++LPDT R+GIVVN+AE+RLYYYP   N V V+PIGIGQ G  T
Sbjct: 72  DVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRET 131

Query: 134 PLQ-VTSVSQKIPNPTWTPTANIRKRYLEKGVKLPGVVPAGPENPMGLFAMRLAMGHGEY 192
           P   VT+V +K   PTWTPT N R+ Y ++G  LP  VPAGP+NPMGL+A+ +      Y
Sbjct: 132 PRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGR---LY 188

Query: 193 LIHGTNANFGIGMRVSSGCIRLRPTDIEALFNMVPRGTRVQVINDPVKISVEPDGKRYVE 252
            IHGTNANFGIG+RVS GCIRLR  DI+ LF+ VP GTRVQ+I+ PVK + EPDG  ++E
Sbjct: 189 AIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLE 248

Query: 253 VHQPLS--RVESDDPQTMPITLSKAEKAFVGDAQTDKAVFDSAVVRRSGMPVLVNVG 307
           VH+PLS  R E +  + +P+ ++ + +AF+   + D    ++A+ RRSGMPV ++ G
Sbjct: 249 VHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSG 305