Pairwise Alignments

Query, 395 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 386 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  235 bits (600), Expect = 1e-66
 Identities = 138/368 (37%), Positives = 213/368 (57%), Gaps = 10/368 (2%)

Query: 21  GARLSAIALLVTLLAGCDNSAAKNAAPPP--PAVSAADVVIKPISQWDTFNGRIEAVQSV 78
           G  L+ +A  V   +   +  A   APPP  PAV+ A    + I+ W  + G+  AV  V
Sbjct: 19  GLALAGVAAGVVSFSSTSSGPA--GAPPPAGPAVTVATPASRTITDWSEYTGQFAAVDYV 76

Query: 79  QLRPRVSGYIDKVNYTEGDEVKKGQVLFTIDDRTYRAAREQAQAELVRARNQAALARSES 138
           ++R RV+GY+ +V++T+G  V KG +LF ID R Y  A   A+A+L +A      A+ + 
Sbjct: 77  EIRARVNGYLTEVHFTDGQLVNKGDLLFVIDPRPYEIALASARAKLDQAMGTKEYAKRQL 136

Query: 139 SRTEKLIGSQAISTEVWEQRRSSAAQAQSNVLAAQAQFDMAQLNLDFTRVIAPIDGRASR 198
           SR  +L   + ++    +QR   +  A + V AA+A    A+LNL FTRV API GR   
Sbjct: 137 SRAGELHRKEFVAESTLDQRTEESRGAGATVEAARAAVRDAELNLQFTRVTAPISGRIGA 196

Query: 199 AMITAGNLVTAGD---SASVLTTLVSLDKVYVYFDVDEATFLRYQNDGRRTAKLPVKVGL 255
             ++ GNLVT G    S ++L+T+VS D ++V FD+ EA +L     G      PV++ L
Sbjct: 197 KQVSIGNLVTGGPTVASPTLLSTIVSQDPIHVTFDLTEADYLAQAKRGNAVG-TPVQLRL 255

Query: 256 VGEDGYPHQGVVDFTDNQLNAGTGTIRMRALLENAERRFTPGLFARVQMPGSAVFNAMLI 315
           + E G+P +G +DF DNQ++ GTGTIR RA+L NAE +   G F RV++  S  + ++++
Sbjct: 256 MSETGWPREGKLDFVDNQIDKGTGTIRARAVLANAEGQVPSGAFGRVRLATSVPYTSLMV 315

Query: 316 DDKSVMTDQDRKFVYIVDKDGKAQRRDIEVGRVADGLRIVRKGLSAGDRVIVDGMQKVFM 375
            D +++TDQ RK V  V KDG    + + +G     LR++R GL+  D+VI++G+ +   
Sbjct: 316 PDTAIVTDQARKLVMTV-KDGTVVPKPVVLGPKDGELRVIRDGLAPDDQVIINGLMRA-R 373

Query: 376 PGMPVAAK 383
           PG  V+A+
Sbjct: 374 PGAKVSAQ 381