Pairwise Alignments

Query, 395 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 408 a.a., efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  255 bits (652), Expect = 1e-72
 Identities = 139/368 (37%), Positives = 219/368 (59%), Gaps = 5/368 (1%)

Query: 24  LSAIALLVTLLAGCDNSAAKNAAPPPPAVSAADVVIKPISQWDTFNGRIEAVQSVQLRPR 83
           L+A+     LL G     A+ AA     V+   + ++ +  W +F+GR+ AV   ++RP 
Sbjct: 32  LAALGGGAVLLRGAPGQPAQAAAAQAAPVTVQTMALRNVQVWSSFSGRMRAVDFAEIRPE 91

Query: 84  VSGYIDKVNYTEGDEVKKGQVLFTIDDRTYRAAREQAQAELVRARNQAALARSESSRTEK 143
           VSG + +V   +G  VK G VLF ID   + AA  +A+A L  AR  A  AR+E  R   
Sbjct: 92  VSGRLTQVRINDGQTVKAGDVLFVIDPAPFEAALAKAEANLATARTNAVFARTELDRAVN 151

Query: 144 LIGSQAISTEVWEQRRSSAAQAQSNVLAAQAQFDMAQLNLDFTRVIAPIDGRASRAMITA 203
           LI ++AI+  ++++R ++   + S VLAA+A+   A +NLD   V API GR SRA IT 
Sbjct: 152 LIKTEAIAQRLYDERANADKVSHSAVLAAEAELKQAHINLDHAYVKAPIAGRVSRAEITL 211

Query: 204 GNLVTAGDSASVLTTLVSLDKVYVYFDVDEATF---LRYQNDGR-RTAKLPVKVGLVGED 259
           GN+V AG  A +LT++VS D +Y  F+VDE T+   +R Q+  R +  ++PV++ + G++
Sbjct: 212 GNVVQAGPGAPLLTSIVSNDGIYADFEVDEQTYMKGIRTQDGSRDKERRIPVQITVRGDE 271

Query: 260 GYPHQGVVDFTDNQLNAGTGTIRMRALLENAERRFTPGLFARVQMPGSAVFNAMLIDDKS 319
            +P+ G +   DN+++  +GTIR RA  +N +    PG+F  V++       A+L+ +++
Sbjct: 272 AHPYLGTIQSFDNRIDTASGTIRARARFDNGDGALMPGMFVSVKVASGGDEPALLVQERA 331

Query: 320 VMTDQDRKFVYIVDKDGKAQRRDIEVGRVADGLRIVRKGLSAGDRVIVDGMQKVFMPGMP 379
           + +DQ +KFVY+V  DGK   R++ +G   DG RIV  GL AG++VIVDG+Q V  P M 
Sbjct: 332 IGSDQSKKFVYVVGDDGKVAYREVGLGPQVDGSRIVLAGLKAGEKVIVDGLQHV-RPNMA 390

Query: 380 VAAKTVAI 387
           V  +  ++
Sbjct: 391 VTVQEASL 398