Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 262 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  145 bits (367), Expect = 6e-40
 Identities = 83/222 (37%), Positives = 120/222 (54%)

Query: 30  HYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARVEHSLQITGKVAARALLVDPLA 89
           H H   QL +++SGV+++ T +G +V PP R VW+PA V H +  +     R+L +D   
Sbjct: 40  HSHPWVQLSYAISGVLEIQTSVGRFVAPPQRAVWIPAGVPHRVFSSPHTEMRSLYLDCSV 99

Query: 90  RADLPASCEVVQISPLLRELIICAMDITADYPAGGREERIMELILDELRVLPILPLNLPE 149
            A     C V+++S LLRELI    ++  +Y   G + R+ +++LD+L   P + L LP 
Sbjct: 100 TAWAVERCHVLEVSSLLRELIRSFSELPVEYAEDGPDGRLAQVVLDQLAAAPQVDLMLPL 159

Query: 150 PRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTLSRRFQRETGLRFGDWVRRARLLA 209
           P    L  + R +         L Q +  + VS +TLSR F  +TGL F  W +R RLL 
Sbjct: 160 PLDPRLRHIYRSLNLRPEQQTTLSQWSQKLGVSEKTLSRLFLSDTGLTFRAWRQRLRLLT 219

Query: 210 ALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVAPSTYF 251
           AL AL  G  V +VAL  GY+S SAF   FR+Q    P  +F
Sbjct: 220 ALPALEQGERVTDVALACGYESTSAFINAFRQQFEATPGEFF 261