Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 265 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 4e-42
 Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 2/247 (0%)

Query: 9   PANRSIVPVAKDYQHGEFEPLHYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARV 68
           P +   V   ++Y  G   P H H   Q  ++ +G +++ T LG+WVVPP R +W+P  +
Sbjct: 12  PDSPEAVVTLREYPSGTVFPRHTHRRGQFAYASTGALKMFTDLGNWVVPPQRAIWVPGGI 71

Query: 69  EHSLQITGKVAARALLV--DPLARADLPASCEVVQISPLLRELIICAMDITADYPAGGRE 126
            H + + G V      +  D   RA L   C+V  +SPLLR L+  A+ I        R+
Sbjct: 72  SHEMHMRGDVVMLNTYLNDDAAQRAGLQDYCQVFGVSPLLRHLLEAALAIGPSASPSVRD 131

Query: 127 ERIMELILDELRVLPILPLNLPEPRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTL 186
             ++ L++DE+  +P LPL+ P P    L + C+   ++      + + A + ++S RT 
Sbjct: 132 RCVLTLLIDEIGAMPELPLSAPLPSEARLARSCQRFLEAPTQKISICEMADWSSMSRRTF 191

Query: 187 SRRFQRETGLRFGDWVRRARLLAALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVA 246
           +R F+  TG+ F  W ++  LL A   L+ G S+ +VA +LG+ S SAF+++FRR LG +
Sbjct: 192 TRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSAFTSVFRRNLGDS 251

Query: 247 PSTYFAK 253
           P+ Y AK
Sbjct: 252 PARYLAK 258