Pairwise Alignments

Query, 646 a.a., MacB family efflux pump subunit from Serratia liquefaciens MT49

Subject, 667 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  492 bits (1267), Expect = e-143
 Identities = 286/652 (43%), Positives = 415/652 (63%), Gaps = 17/652 (2%)

Query: 4   IIELKGIGRTYTNSSEPLTVLKNINLKIAAGELVAIIGASGSGKSTLMNIIGCLDVPDQG 63
           +I+L GI +TY N    + VL  I+LKI  GELVAI+GASGSGKSTLMNI+GCLD P  G
Sbjct: 24  LIDLSGITKTYHNGDLSVEVLHGIDLKIYPGELVAIMGASGSGKSTLMNILGCLDKPTTG 83

Query: 64  DYFISGHNAAHLSPDELARLRREHIGFIFQRYHLMPDISALGNVEIPAIYANSKRDQRRL 123
            Y   G + + L  DELA LRR+  GF+FQ Y+L+   +A  NVE+PAIYA     +R  
Sbjct: 84  RYLFMGRDVSELERDELAELRRDAFGFVFQSYNLIATGTAADNVEVPAIYAGIPPAERHA 143

Query: 124 RAAQLLARLGLEGREHHKPGQLSGGQQQRVSIARSLINGGEIILADEPTGALDSKSGQEV 183
           RA +LL  LGL  R HH+P QLSGGQQQRVSIAR+L+NGG +ILADEPTGALDSKSG +V
Sbjct: 144 RATELLGSLGLGDRMHHRPNQLSGGQQQRVSIARALMNGGRVILADEPTGALDSKSGADV 203

Query: 184 LAILSELNQRGHTVVIVTHDMKVAQHAQRIIELQDGEIVADSGCQSPVPPPVMKKSPPVA 243
           + +L EL  +GHTV+++TH  +VAQHAQR+IE++DG I+AD G + P     +      A
Sbjct: 204 MVLLKELAAQGHTVILITHAAEVAQHAQRVIEIKDGHILADPGPRPPEGQAALAAQNWTA 263

Query: 244 QGYWQSLLDRTRESLQMALKAMNAHRLRTALTMTGIIFGIAAVVTVVALGEGAKQRTLES 303
           +    S L    E+ + AL+A+ A+  R  LT+ GI+ G+A+V+ ++A+G+GAKQ  ++ 
Sbjct: 264 RAGRISHLSDVVEAAKTALRALRANVFRAILTLLGIVIGVASVIAMLAIGDGAKQVVIDR 323

Query: 304 IKDLGTNVVSIYPGRDFFDDSIDSIRTLVPADADALASQ-SFVDSVSPEVSASENIRFRS 362
           I  +G+N++ + PG         +  TLV AD +A+  +   V +  PE S++  +R+  
Sbjct: 324 ISAMGSNLLLVRPGAP-NQRGFQNTATLVLADVNAIDKEVPNVLAAVPEQSSNATLRYGE 382

Query: 363 KSANASISGVGRDNLRVSGLKLIQGRNFL--DDRNALQEVIIDENARQALF-GDFGVEPL 419
              ++SI G           K+ +G  F   D++      ++ +   +ALF GD   EPL
Sbjct: 383 SDYSSSILGTSSKFPLARQWKVQRGTFFTDEDEQEYATVAVLGQTVAKALFPGD--EEPL 440

Query: 420 GQIVFLGAVPARVVGVVQSNQDSAPNRIR----VWMPYSTVMYRMVGKSTLSSINVRLKE 475
           G+ V +  +  +VVGV+ S + ++PN       V +PY+T   R+ G+  L ++ V + +
Sbjct: 441 GKYVLVNNLIFQVVGVM-STRGASPNGQDQDDVVLVPYATSQLRLSGQRFLRNVTVAVSD 499

Query: 476 DVSNEAAVAAIKQLLTQRHGVKDFMLFNLDKYRKSIEHTSMTLTLLILMVASISLIIGSL 535
               +   +A++ LL +RHGV DF + N+     +   T  T+T+L+  +A+ISL++G +
Sbjct: 500 VSRIDETQSAVESLLAERHGVIDFQIRNMASIIDTATETQNTMTILLGSIAAISLLVGGI 559

Query: 536 GVMNIMLVSVTERTHEIGVRMAVGARRSDIMQQFMIEAVLVCLIGGALGILLSFAAGSLF 595
           GVMNIMLVSVTERT EIG+RMA GAR  +I+QQF+IEA++V  +GG +G+++    G  F
Sbjct: 560 GVMNIMLVSVTERTREIGIRMATGARMRNILQQFLIEALVVSALGGLVGVVIGL--GVAF 617

Query: 596 TLLAGGMLTAI-YSWQAAAVAFCCSTLIGMIFGYLPARKAARMDPVISLASE 646
            + A G  TA+ +S     +AF C+   G+IFGYLPARKAAR+DPV++L+SE
Sbjct: 618 VIGATG--TAVQFSVTPVVLAFGCAFATGLIFGYLPARKAARLDPVVALSSE 667