Pairwise Alignments

Query, 646 a.a., MacB family efflux pump subunit from Serratia liquefaciens MT49

Subject, 648 a.a., macrolide ABC transporter peremase/ATPase from Escherichia coli BL21

 Score =  603 bits (1554), Expect = e-176
 Identities = 328/658 (49%), Positives = 443/658 (67%), Gaps = 22/658 (3%)

Query: 1   MNTIIELKGIGRTYTNSSEPLTVLKNINLKIAAGELVAIIGASGSGKSTLMNIIGCLDVP 60
           M  ++ELK I R+Y    E + VLK I L I AGE+VAI+GASGSGKSTLMNI+GCLD  
Sbjct: 1   MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKA 60

Query: 61  DQGDYFISGHNAAHLSPDELARLRREHIGFIFQRYHLMPDISALGNVEIPAIYANSKRDQ 120
             G Y ++G + A L  D LA+LRREH GFIFQRYHL+  ++A  NVE+PA+YA  +R Q
Sbjct: 61  TSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQ 120

Query: 121 RRLRAAQLLARLGLEGREHHKPGQLSGGQQQRVSIARSLINGGEIILADEPTGALDSKSG 180
           R LRA +LL RLGLE R  + P QLSGGQQQRVSIAR+L+NGG++ILADEPTGALDS SG
Sbjct: 121 RLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSG 180

Query: 181 QEVLAILSELNQRGHTVVIVTHDMKVAQHAQRIIELQDGEIVADSGCQSPVPPPVMKK-- 238
           +EV+AIL +L  RGHTV+IVTHD +VA  A+R+IE++DGEIV +        PP ++K  
Sbjct: 181 EEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRN--------PPAIEKVN 232

Query: 239 ----SPPVAQ--GYWQSLLDRTRESLQMALKAMNAHRLRTALTMTGIIFGIAAVVTVVAL 292
               + PV      W+  +    E+L MA +A+ A+++RT LTM GII GIA+VV++V +
Sbjct: 233 VAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVV 292

Query: 293 GEGAKQRTLESIKDLGTNVVSIYPGRDFFDDSIDSIRTLVPADADALASQSFVDSVSPEV 352
           G+ AKQ  L  I+ +GTN + +YPG+DF DD     + L   D  A+  Q +V S +P V
Sbjct: 293 GDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAV 352

Query: 353 SASENIRFRSKSANASISGVGRDNLRVSGLKLIQGRNFLDDR--NALQEVIIDENARQAL 410
           S +  +R+ +    AS +GV  D   V G+   +G  F  ++     Q V++D N R+ L
Sbjct: 353 SQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQL 412

Query: 411 FGDFGVEPLGQIVFLGAVPARVVGVVQSNQD--SAPNRIRVWMPYSTVMYRMVGKSTLSS 468
           F     + +G+++ +G +PARV+GV +  Q    +   +RVW+PYST+  R++G+S L+S
Sbjct: 413 F-PHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNS 471

Query: 469 INVRLKEDVSNEAAVAAIKQLLTQRHGVKDFMLFNLDKYRKSIEHTSMTLTLLILMVASI 528
           I VR+KE   +  A   + +LL+ RHG KDF  +N+D   K++E T+ TL L + +VA I
Sbjct: 472 ITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVI 531

Query: 529 SLIIGSLGVMNIMLVSVTERTHEIGVRMAVGARRSDIMQQFMIEAVLVCLIGGALGILLS 588
           SL++G +GVMNIMLVSVTERT EIG+RMAVGAR SD++QQF+IEAVLVCL+GGALGI LS
Sbjct: 532 SLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLS 591

Query: 589 FAAGSLFTLLAGGMLTAIYSWQAAAVAFCCSTLIGMIFGYLPARKAARMDPVISLASE 646
                   L   G     +S  A  +AF CST+ G++FG+LPAR AAR+DPV +LA E
Sbjct: 592 LLIAFTLQLFLPGWEIG-FSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648