Pairwise Alignments

Query, 336 a.a., quinone-dependent dihydroorotate dehydrogenase from Serratia liquefaciens MT49

Subject, 363 a.a., Dihydroorotate dehydrogenase (EC 1.3.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  329 bits (844), Expect = 6e-95
 Identities = 174/343 (50%), Positives = 228/343 (66%), Gaps = 16/343 (4%)

Query: 3   YPLIRKALFQLDPERAHELTFHQLRRVTGTPLEFVIRQSVPTKPVSCMGLSFKNPLGLAA 62
           Y + R  LF LDPE AHELT   + R+  +PL  +  +     P +  GL F N +GLAA
Sbjct: 6   YGVARPFLFSLDPEAAHELTLGSIARLQNSPLTCLYGEPRVHDPYTLAGLQFPNRVGLAA 65

Query: 63  GLDKDGECIDAFGAMGFGFVEVGTVTPRPQSGNDKPRLFRIVEAEGLINRMGFNNQGVDN 122
           GLDK+  CID   AMGFGFVEVGTVTP+ Q GN KPR+FR+ +A+ LINR+GFNN+G+D 
Sbjct: 66  GLDKNARCIDGLAAMGFGFVEVGTVTPKAQPGNPKPRMFRLPKAQALINRLGFNNEGLDA 125

Query: 123 LVENVKKSHFGG-------ILGINIGKNKDTPVEQGKDDYLICMDKVYPYAGYIAINISS 175
            + NVKK+ F         +LG+NIGKN  TP+E+  DDYL C+D VYP+A Y+ +NISS
Sbjct: 126 FITNVKKARFRQQNGVSPMLLGLNIGKNASTPIERATDDYLTCLDGVYPHADYVTVNISS 185

Query: 176 PNTPGLRSLQYGEALDDLLVAIKNKQQELHARHHKYVPVAVKIAPDLSEEELIQIADSLV 235
           PNT  LRSLQ  EALD LL A+  +++ L  RH + +PV VKIAPDL E ++  IA +L+
Sbjct: 186 PNTQNLRSLQSDEALDALLGAVAERRELLAQRHGRRIPVFVKIAPDLDETQVEIIATTLM 245

Query: 236 RHNID---------GVIATNTTLDRKLIQGLNYCEQMGGLSGRPLQASSTEVIRRLSLEL 286
           R+  D         GVIATNTTL R+ + GL + ++ GGLSG P+  +S  VIR+L   L
Sbjct: 246 RYGSDSDGVATSAFGVIATNTTLSREAVAGLPHAQETGGLSGAPVLQASNRVIRQLRACL 305

Query: 287 QGRLPIIGVGGIDSLMAAREKMAAGASLVQIYSGFIFKGPRLI 329
               PIIGVGG+ S   A  K+ +GA+LVQIY+G I++GP L+
Sbjct: 306 GKSFPIIGVGGVMSAEDAVSKIQSGANLVQIYTGLIYQGPALV 348