Pairwise Alignments
Query, 1191 a.a., DNA translocase FtsK 4TM domain-containing protein from Serratia liquefaciens MT49
Subject, 1329 a.a., DNA translocase FtsK from Escherichia coli HS(pFamp)R (ATCC 700891)
Score = 1032 bits (2668), Expect = 0.0
Identities = 620/1072 (57%), Positives = 715/1072 (66%), Gaps = 116/1072 (10%)
Query: 200 FMTNRSRRDERYHDDDDRYVEDQPESAEKGAALAAASTAAVANAAEDDVLFSAPSVTETA 259
F NR+ + E +D+ D + P + E A AAA+TA + AA + + P V
Sbjct: 294 FSGNRATQPE--YDEYDPLLNGAPIT-EPVAVAAAATTATQSWAAPVEPVTQTPPVASVD 350
Query: 260 KMAAE-----------EAEDPLLS---------------GLRANDDEDADVAPVAP--AV 291
A+ + +P+++ ++ N+ V P P A
Sbjct: 351 VPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAP 410
Query: 292 AREPVTAAPVVAQAPSVTVAPTA-----------PASVNQSPMSTPAENSAPPLYSFEIP 340
A E P A AP VA A P S Q+ + + PLY P
Sbjct: 411 AAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQP 470
Query: 341 -------EETPTPKVTRPADP----YQDDDEPR------MGNWDAPATSPSHDRSPFDFS 383
E P + T+PA P +++ +E R + W P P + P S
Sbjct: 471 VEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSS 530
Query: 384 AAQRDSADITAPAGFSAGEPAVPSFGSVKPQAQAAATA-VAGAVAANTFMPAFTATSDAN 442
+ AP+ A P V + +V P A A +A AA P F+ +
Sbjct: 531 --------LKAPS--VAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGG 580
Query: 443 S--QVKQGLGPELPRPNPVRIPTRRELASYGIKLPSQRMAEQE----QRNRGDDEPLPNA 496
QVK+G+GP+LPRP +R+PTRRELASYGIKLPSQR AE++ QRN+ D N
Sbjct: 581 PRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYN- 639
Query: 497 NALPSDQDDEALQEAALRQAFAEQQNQRYGEEYAQD---NQDDEAALQEAELRQAFAEQQ 553
D + +A+Q+ L + FA+ Q QRYGE+Y D N +D A EAEL + FA+ Q
Sbjct: 640 -----DDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQ 694
Query: 554 NQRYGQQEAAPSVQPTTPVDTRNAFGFSPMDDLVDDGPVEPLFTLSPQLEDRIEQQSERE 613
QRY ++ A P + D F FSPM L+DDGP EPLFT P +E Q ++
Sbjct: 695 QQRYSGEQPA-GANPFSLDD----FEFSPMKALLDDGPHEPLFT--PIVEP---VQQPQQ 744
Query: 614 DDVPFGQFE------PAAPAYVPPTQPQTPPAQAYQPAQPA-----YQQPAAQQQPPAYQ 662
P Q++ P P Y P QP P Q QP QP YQQP QQP A Q
Sbjct: 745 PVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQP---QQPVAPQ 801
Query: 663 QPVAQPA-PTAPQQPAMDSLIHPFLMRN--DMPLQKPTTPLPTLDLLTEAPKEVEPVDSF 719
Q QP P APQ D+L+HP LMRN PL KPTTPLP+LDLLT P EVEPVD+F
Sbjct: 802 QQYQQPQQPVAPQP--QDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTF 859
Query: 720 ALEQKARLVEASLADYRVKADVVDILPGPVITRFELDLAPGVKAARISNLSRDLARSLST 779
ALEQ ARLVEA LAD+R+KADVV+ PGPVITRFEL+LAPGVKAARISNLSRDLARSLST
Sbjct: 860 ALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLST 919
Query: 780 SAVRVVEVIPGKPYVGLELPNVKRQTVYLREVLDCPAFRDNPSPLAIVLGKDISGEPVVA 839
AVRVVEVIPGKPYVGLELPN KRQTVYLREVLD FRDNPSPL +VLGKDI+GEPVVA
Sbjct: 920 VAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVA 979
Query: 840 DLAKMPHLLVAGTTGSGKSVGVNAMILSILYKATPKEVRFIMIDPKMLELSVYEGIPHLL 899
DLAKMPHLLVAGTTGSGKSVGVNAMILS+LYKA P++VRFIMIDPKMLELSVYEGIPHLL
Sbjct: 980 DLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLL 1039
Query: 900 TDVVTDMKDAANALRWCVAEMERRYKLMSALGVRNLAGYNERVDQAEAMGRPIPDPFWKP 959
T+VVTDMKDAANALRWCV EMERRYKLMSALGVRNLAGYNE++ +A+ M RPIPDP+WKP
Sbjct: 1040 TEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKP 1099
Query: 960 TDSMDITPPVLEKEPYIVVMVDEFADLIMTVGKKVEELIARLAQKARAAGIHLVLATQRP 1019
DSMD PVL+KEPYIVV+VDEFADL+MTVGKKVEELIARLAQKARAAGIHLVLATQRP
Sbjct: 1100 GDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRP 1159
Query: 1020 SVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAESLLGMGDMLYLAPNSSIPVRVHG 1079
SVDVITGLIKANIPTRIAFTVSSKIDSRTILDQ GAESLLGMGDMLY PNS++PVRVHG
Sbjct: 1160 SVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHG 1219
Query: 1080 AFVRDQEVHAVVKDWKARERPQYKEGILNGGDDGEGGAGGGLEGDEELDPLFDQAVEFVV 1139
AFVRDQEVHAVV+DWKAR RPQY +GI + EGGA GG +G EELDPLFDQAV+FV
Sbjct: 1220 AFVRDQEVHAVVQDWKARGRPQYVDGI-TSDSESEGGA-GGFDGAEELDPLFDQAVQFVT 1277
Query: 1140 DKRRASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPRHD 1191
+KR+ASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPP D
Sbjct: 1278 EKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD 1329
Score = 360 bits (925), Expect = e-103
Identities = 215/483 (44%), Positives = 271/483 (56%), Gaps = 36/483 (7%)
Query: 1 MSQEYTEDKEVTLRKLSSGRRLLEAVLIVVAIFAIYLMAALVSFNPSDPSWSQTAWHEPI 60
MSQEYTEDKEVTL KLSSGRRLLEA+LI++ +FA++LMAAL+SFNPSDPSWSQTAWHEPI
Sbjct: 1 MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPI 60
Query: 61 HNLGGGVGAWLADTLFFTFGVLAYAIPPIMLVLCWAAYRQRGSGEYIDYFALSLRLIGTL 120
HNLGG GAWLADTLFF FGV+AY IP I++ CW A+R + S EYIDYFA+SLR+IG L
Sbjct: 61 HNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVL 120
Query: 121 ALVLTSCGLAALNVDDLYYFASGGVIGSLLSNAMLPWFNGIGATLALLCVWAAGLTLFTG 180
AL+LTSCGLAA+N DD++YFASGGVIGSLLS + P + G T+ALLCVWAAGLTLFTG
Sbjct: 121 ALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTG 180
Query: 181 WSWLVIAERIGGVVLGTATFMTNRSRRDERYHD----DDDRYVEDQPESAEKGAALAAAS 236
WSW+ IAE++GG +L TF +NR+RRD+ + D +DD ED+ + + A
Sbjct: 181 WSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDAEYEDENHGKQHESRRARIL 240
Query: 237 TAAVANAAE-------------DDVLFSA------PSVTETAKMAAEEAEDPLLSGLRAN 277
A+A D LFS +T TA+ A + +D L SG RA
Sbjct: 241 RGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRAT 300
Query: 278 DDEDADVAPVA-PAVAREPVTAAPVVAQAPSVTVAPTAPASVNQSPMSTPAENSAPPLYS 336
E + P+ A EPV A A AP P V Q+P A PP
Sbjct: 301 QPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEP--VTQTP--PVASVDVPPAQP 356
Query: 337 FEIPEETPTPKVTRPADPYQDDDEPRMGNWDAPATSPSHDRSPFDFSAAQRDSADITAPA 396
+ P P+ P + P+ + PA + + APA
Sbjct: 357 TVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNE-----PLQQPVQPQQPYYAPA 411
Query: 397 GFSAGEPAVPSFGSVKPQAQAAATAVAGAVAANTFMPAFTATSDANSQVKQGLGPELPRP 456
A +PA + + P+ A A +TF P T ++ Q P +P
Sbjct: 412 ---AEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQP 468
Query: 457 NPV 459
PV
Sbjct: 469 QPV 471