Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

Subject, 299 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 8/287 (2%)

Query: 6   HWRLLVAVADSGKITLAASQCGMTQSGASQAIAQLEEALNTSLLVRLPHSVTLTQSGEQI 65
           H    +AVA+ G  T AAS   ++Q   SQ I QLEE+L   L  R   ++ LT +GE  
Sbjct: 5   HINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVW 64

Query: 66  VSHARTMLAELNAIQHCAQQAQSSHAGKIRLASFPSAFALLLPPLLRKFHRRFPAIELVQ 125
             +A   L EL A +           G +R+A  P+  +  + PL+  F+ R+P+I L  
Sbjct: 65  RQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQL 124

Query: 126 LEGTDLEVENWLALEAADVGIVLNP--KPERQSHPLGKDLWLAVTATDHKLARNRQPIDF 183
            E +  ++E+ L  +  DVGI   P   PE ++ PL  +    V A  H LA + Q +  
Sbjct: 125 QEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQ-VAL 183

Query: 184 NELVKQPFVLATGGCQLNAQL--LAQQAGLALTDVRVTVSDWNTALTLVREGIGVSLVPA 241
           + L  +  VL +       Q+    ++AGL    V +  +  +  L L+R     +L+PA
Sbjct: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLH-PQVVIEANSISAVLELIRRTSLSTLLPA 242

Query: 242 SVIPADTPGICALPLSAPLYRHFGLVCSFAGA-SSAPVQTLLHFLQD 287
           + I     G+ A+ L+ PL     ++     +  +A  +  LH   D
Sbjct: 243 A-IATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALD 288