Pairwise Alignments

Query, 380 a.a., macrolide transporter subunit MacA from Serratia liquefaciens MT49

Subject, 393 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

 Score =  106 bits (264), Expect = 1e-27
 Identities = 89/362 (24%), Positives = 166/362 (45%), Gaps = 13/362 (3%)

Query: 16  HKRR--WIIALIVAAVIAVPAVWHFGHPTPTQFKTVKVTLGSLQQNVLATGQLDAVRKVD 73
           HKR    I  ++  A++ +  V   G   PT    ++V+  S+   +   G ++A  +  
Sbjct: 17  HKRTAALIAIMLPLALLFIYVVVRSGPLAPTLVTQIQVSKVSISPALFGIGTVEARYQYK 76

Query: 74  VGAQVSGQLESLYVEIGDRVKKGQLLGVIDPQQAKNSIREGEATLRELHAQLQQAQAEQQ 133
           VG  + G++++L V+IGD+V KGQLLGV+D    +  +   ++ L +  A+LQ+AQ   Q
Sbjct: 77  VGPTIPGRVQTLKVDIGDQVTKGQLLGVMDSVDLEQRMEAQQSALMQAKAKLQEAQTRYQ 136

Query: 134 LAAVTLQRNQALAKLQAVSRQDLDQAATQLAVKKAQVGTIHAQIAKNQASLDTAKINLAF 193
            +    +R Q L +  ++S +          + +A +     ++ + +A     +     
Sbjct: 137 FSDEQFKRYQKLLESNSISEEQFLVKQQDYHIAEAGLAAARQELLRQEAEQKAMQAQQHN 196

Query: 194 TRIEAPMDGDVVQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVISLKPGQKA 253
             + +P+DG VV+    QG TV+A Q    I+   D+    +  +  +     L PG  A
Sbjct: 197 LDLISPIDGIVVKRNAEQGTTVVAGQSVIEIINPEDI---WINVRFDQIHSTGLNPGLTA 253

Query: 254 WFTVLGDPNRRFDGVLKDIQPTPEKVNNAIFYYARFEVPN-PEGLLRLQMTAQVHIQLAG 312
              +         G +  ++P  + V     + A+  +   P+ L  +   A+V I+L  
Sbjct: 254 LVNLRSKSKLDLSGKIYRVEPIADAVTEE--FLAKVTIDELPQPLPSIGELAEVTIELDS 311

Query: 313 VNQAQIIPLAALGDQIADNRYQVSILKQGKEEKREVAIGLRNNID--VQILSGLNIGDEV 370
           +    +IP AAL  +  D    V  +  G  E   V+IG   ++D  V+I  GL++G+ V
Sbjct: 312 LPSTTVIPNAAL--KRIDGELGVWKIIDGDIEYVPVSIG-ATDLDGLVEIKKGLSLGESV 368

Query: 371 IV 372
           ++
Sbjct: 369 VL 370