Pairwise Alignments

Query, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  659 bits (1701), Expect = 0.0
 Identities = 345/607 (56%), Positives = 453/607 (74%), Gaps = 20/607 (3%)

Query: 21  VLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKSVTSLALMRLVEQGGG 80
           +LSV  LSV+F   GD+   V ++SF ++ G T+A+VGESGSGKSVTSL+ MRL +  G 
Sbjct: 9   LLSVEGLSVEF---GDS-RVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGA 64

Query: 81  NIVSGTMPFRRRNGEVLDLAHARQGTLRTVRGADMAMIFQEPMTSLNPVFPVGEQIAESL 140
              +G + F  +     DL  A Q  +R++RG ++AMIFQEPMTSLNPVF +G+QI E L
Sbjct: 65  TYPTGKILFEGK-----DLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVL 119

Query: 141 RLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGGMRQRVMIAMALSCKPALLI 200
            LH+ +   AA + A Q+LD+VR+P+  ++L+RYPHQLSGGMRQRVMIAMAL+C+P LLI
Sbjct: 120 VLHEKLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLI 179

Query: 201 ADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVVAEIADRVLVMRQGEQVEQG 260
           ADEPTTALDVTIQAQIL ++R LQ+++ MG++FITHDMGVVAE+AD V+VM +G++VE+G
Sbjct: 180 ADEPTTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEG 239

Query: 261 PVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNGADNGGP--------QDTVP 312
           PV+++FA PQ PYT+ALL+AVPRLGSM    FP + PL     +G P        QDT  
Sbjct: 240 PVKDIFANPQHPYTRALLSAVPRLGSMEGEAFPKRLPL-TVLQDGQPVVIGEERVQDTAK 298

Query: 313 PGATPILRVENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTG 372
               P+L V++L  RFD+R  +  + T R+ AV+ VSFD++ GETL LVGESG GKST G
Sbjct: 299 YDQKPLLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIG 358

Query: 373 RSLLKLVDSQRGTITFDGRQINQLKGPALQHLRRDIQFIFQDPYASLDPRLTVGFSIMEP 432
           R++ +L  +  G I F+GR  +Q+       +R+++Q+IFQDP+ASLDPR TVGFSI EP
Sbjct: 359 RTIQQLQTAVSGEIAFNGRSYSQMSAAERFRMRQEVQYIFQDPFASLDPRKTVGFSIAEP 418

Query: 433 LLVHNVARG-KAAQERVAWLLERVGLKPEHARRYPHEFSGGQRQRICIARALALNPKVVI 491
           +  H +    KA + RV  LLERVGL  EHA RYPHEFSGGQRQR+CIARALA +PK++I
Sbjct: 419 INTHGLINDQKAVRRRVDELLERVGLSSEHAARYPHEFSGGQRQRVCIARALASDPKLII 478

Query: 492 ADESVSALDVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIG 551
           ADE++SALDVSIQAQI+NL +DLQ E G+A+LFISHDMAVVE++SHRVAV+YLGQI+E+G
Sbjct: 479 ADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIMELG 538

Query: 552 PRRAVFENPQHAYTRKLMAAVPVADPNHAYKRQPLLVDEIPSPIRALGDEPVTAPLVQVG 611
            R+ VFE P H YTR+L++AVPVADP    +R  ++  EIP+P+R +GDEP      ++ 
Sbjct: 539 SRQQVFETPTHDYTRRLLSAVPVADPT-IERRIAMIEGEIPNPVRRVGDEPAILAHEEIN 597

Query: 612 PGHFVAR 618
           PGHF+A+
Sbjct: 598 PGHFIAK 604