Pairwise Alignments

Query, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  653 bits (1685), Expect = 0.0
 Identities = 344/601 (57%), Positives = 436/601 (72%), Gaps = 11/601 (1%)

Query: 21  VLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKSVTSLALMRLVEQGGG 80
           VLSV++L+  F+  G     VRN+SFD+   ET+AIVGESGSGKSVTSL++MRL+++   
Sbjct: 18  VLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDRKTS 77

Query: 81  NIVSGTMPFRRRNGEVLDLAHARQGTLRTVRGADMAMIFQEPMTSLNPVFPVGEQIAESL 140
            I    M   R      DL    +  +R VRG D++MIFQEPMTSLNP+FP+G+QIAE+L
Sbjct: 78  RIEGKVMLGGR------DLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEAL 131

Query: 141 RLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGGMRQRVMIAMALSCKPALLI 200
            +HQ +   AA+   +++L+ VRIP        YPHQ SGGMRQRVMIAMAL+ KP LLI
Sbjct: 132 TVHQDISSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLI 191

Query: 201 ADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVVAEIADRVLVMRQGEQVEQG 260
           ADEPTTALDVTIQ QIL LI+ LQ+E  M V+FITHDMGVVAE+ADR +VM +G+ VE G
Sbjct: 192 ADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETG 251

Query: 261 PVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNGADNGGP-----QDTVPPGA 315
              ++F   Q PYT+ALL+AVP+LGSM     PA+FP+ +      P     +DTV  G 
Sbjct: 252 TTDDIFHRGQHPYTRALLSAVPKLGSMRSRLLPARFPIIDIKTGESPPVVETKDTVSGGK 311

Query: 316 TPILRVENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTGRSL 375
           TPIL V++L TRFD+RSG+  R +  VHAVE VSFDL  GETL LVGESGCGKSTTGRS+
Sbjct: 312 TPILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSI 371

Query: 376 LKLVDSQRGTITFDGRQINQLKGPALQHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLV 435
            +L++   G +T DG ++ +L    L+ +RR +Q +FQDP+ASLDPR++VG +IMEP + 
Sbjct: 372 TRLIEPTSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFME 431

Query: 436 HNVARGKAAQERVAWLLERVGLKPEHARRYPHEFSGGQRQRICIARALALNPKVVIADES 495
           H + +   A+E+ A LLE+VGL P+  +R+PHEFSGGQRQRI IAR+L L+PKV++ADE+
Sbjct: 432 HRLGQKAQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEA 491

Query: 496 VSALDVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 555
           VSALDVSI+AQ+ NLLLDLQ+   +AFLFISHDMAVVER+SHRVAVMYLG+IVEIGPR A
Sbjct: 492 VSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAA 551

Query: 556 VFENPQHAYTRKLMAAVPVADPNHAYKRQPLLVDEIPSPIRALGDEPVTAPLVQVGPGHF 615
           VF+NPQH YT+KLM+AVPV DP     R+ +  DEI SPIR +   P      +   GH 
Sbjct: 552 VFDNPQHPYTKKLMSAVPVPDPARRQIRRNMATDEIKSPIRPVDYVPPQRHYREDSAGHL 611

Query: 616 V 616
           V
Sbjct: 612 V 612



 Score =  202 bits (514), Expect = 3e-56
 Identities = 117/266 (43%), Positives = 162/266 (60%), Gaps = 16/266 (6%)

Query: 316 TPILRVENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTGRSL 375
           +P+L V+NL T F +  G  +        V N+SFD+ P ET+ +VGESG GKS T  S+
Sbjct: 16  SPVLSVQNLTTSFRVDGGWKS-------VVRNMSFDIAPRETVAIVGESGSGKSVTSLSI 68

Query: 376 LKLVDSQ----RGTITFDGRQINQLKGPALQHLR-RDIQFIFQDPYASLDPRLTVGFSIM 430
           ++L+D +     G +   GR +  L    ++ +R +DI  IFQ+P  SL+P   +G  I 
Sbjct: 69  MRLLDRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIA 128

Query: 431 EPLLVHNVARGKAAQERVAWLLERVGLKPEHARR---YPHEFSGGQRQRICIARALALNP 487
           E L VH      AA+  V  LLE+V + P  A R   YPH+FSGG RQR+ IA ALA  P
Sbjct: 129 EALTVHQDISSSAAKAEVIRLLEKVRI-PNAASRFGDYPHQFSGGMRQRVMIAMALASKP 187

Query: 488 KVVIADESVSALDVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQI 547
           K++IADE  +ALDV+IQ QI++L+  LQ E G++ LFI+HDM VV  ++ R  VM+ G +
Sbjct: 188 KLLIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDV 247

Query: 548 VEIGPRRAVFENPQHAYTRKLMAAVP 573
           VE G    +F   QH YTR L++AVP
Sbjct: 248 VETGTTDDIFHRGQHPYTRALLSAVP 273