Pairwise Alignments

Query, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  494 bits (1273), Expect = e-144
 Identities = 276/587 (47%), Positives = 384/587 (65%), Gaps = 34/587 (5%)

Query: 17  PPQRVLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKSVTSLALMRLVE 76
           P + +L VR+L  +F  +     AV ++SF ++ G+TL +VGESGSGKSVT+ +++++++
Sbjct: 3   PAKPLLEVRNLVTEFPLRTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIID 62

Query: 77  QGGGNIVSGTMPFRRRNGEVLDLAHA--RQGTLRTVRGADMAMIFQEPMTSLNPVFPVGE 134
             G  I SG++   + +G  +DLA    R   +R VRGAD+AMIFQEPM+SL+PV  VG+
Sbjct: 63  SPG-YITSGSIILNKADGSSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGD 121

Query: 135 QIAESLRLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGGMRQRVMIAMALSC 194
           QI E LRLH  M    AR  A+++L  V IP  +  L+RY  Q SGGMRQR MIAMAL+C
Sbjct: 122 QITEVLRLHLKMSKAQARAEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALAC 181

Query: 195 KPALLIADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVVAEIADRVLVMRQG 254
           KP LLIADEPTTALDVT QA+IL LI  LQ+   M V+FITHDMGVVA+IAD VLVM  G
Sbjct: 182 KPQLLIADEPTTALDVTTQAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHG 241

Query: 255 EQVEQGPVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNGADNGGPQDTVPPG 314
              E G V ++F  PQ PYT+ L+ +V +L   A++   A+ PL                
Sbjct: 242 VVKEYGTVEQIFHKPQDPYTRMLIGSVLKLEQKAEIRL-ARPPLDQ-------------T 287

Query: 315 ATPILRVENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTGRS 374
           A PIL V++L   F             + A++ VS  L PGETLG+VGESG GK+T GRS
Sbjct: 288 AAPILEVKDLSMHFG-----------EMKALDGVSIKLLPGETLGIVGESGSGKTTMGRS 336

Query: 375 LLKLVDSQRGTITF---DGR--QINQLKGPALQHLRRDIQFIFQDPYASLDPRLTVGFSI 429
           +++L D   G + +   DG    +++++G  L+  RR+++ +FQDP+ SL+PR+TV   I
Sbjct: 337 IMRLYDPTAGEMLYRRADGSVVDLSKIEGKELKAARRELRMVFQDPFGSLNPRMTVAQVI 396

Query: 430 MEPLLVHNVARGKAAQERVAWLLERVGLKPEHARRYPHEFSGGQRQRICIARALALNPKV 489
            EPLLV+ +A+GK  +ERV  L+E+VGL P    RYPH FSGGQRQRI IARA+ L P++
Sbjct: 397 GEPLLVNGIAKGKELEERVCSLMEQVGLDPSGRERYPHAFSGGQRQRIGIARAITLRPRI 456

Query: 490 VIADESVSALDVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVE 549
           ++ADE+ SALDVS++ Q+++LL+ LQ E G+A++FISHD+ V+  +  RV VMY G++VE
Sbjct: 457 IVADEATSALDVSVRFQVLDLLMKLQDELGLAYIFISHDIGVIRYMCDRVGVMYRGKLVE 516

Query: 550 IGPRRAVFENPQHAYTRKLMAAVPVADPNHAYKRQPLLVDEIPSPIR 596
           +G    V   P H YT+ L++A+P  DP    + +     E P+PI+
Sbjct: 517 VGEAEKVCNAPDHPYTQALLSAIPRPDPRDRDRTRRFRYVE-PAPIK 562