Pairwise Alignments

Query, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  659 bits (1700), Expect = 0.0
 Identities = 352/621 (56%), Positives = 441/621 (71%), Gaps = 22/621 (3%)

Query: 6   MPLAADAGLLLPPQRVLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKS 65
           MP AA  G       VLSVR+L+  F   G     VR++SFD+  GET+AIVGESGSGKS
Sbjct: 3   MPQAAPLGA---EDAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKS 59

Query: 66  VTSLALMRLVEQGGGNIVSGTMPFRRRNGEVL----DLAHARQGTLRTVRGADMAMIFQE 121
           VTSL++MRL+++    +           GE+L    +L    +  +R VRG ++AMIFQE
Sbjct: 60  VTSLSIMRLLDRESSRV----------QGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQE 109

Query: 122 PMTSLNPVFPVGEQIAESLRLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGG 181
           PMTSLNP+F +G+QI+E+L  HQ M    AR   +++L+ VRIP      + YPH+ SGG
Sbjct: 110 PMTSLNPLFTIGDQISEALLCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGG 169

Query: 182 MRQRVMIAMALSCKPALLIADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVV 241
           MRQRVMIAMAL+ KP LLIADEPTTALDVTIQ QIL LI+ LQ+E    V+FITHDMGVV
Sbjct: 170 MRQRVMIAMALASKPKLLIADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVV 229

Query: 242 AEIADRVLVMRQGEQVEQGPVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNG 301
           AEIADR +VM +GEQVE G   ++F   + PYT+ALL+AVP LGSM   + P +FP+ N 
Sbjct: 230 AEIADRTVVMYRGEQVEVGATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNT 289

Query: 302 ADNGG-----PQDTVPPGATPILRVENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGE 356
           A         P DTV   A P+L+VE L  RFD+ SG+L R++ RVHAVENVSFDL  GE
Sbjct: 290 ATGETQEPVRPADTVDASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGE 349

Query: 357 TLGLVGESGCGKSTTGRSLLKLVDSQRGTITFDGRQINQLKGPALQHLRRDIQFIFQDPY 416
           TL LVGESGCGKSTTGR++++L++   G++  +G  I  L    ++ +R+ +Q IFQDP+
Sbjct: 350 TLSLVGESGCGKSTTGRAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPF 409

Query: 417 ASLDPRLTVGFSIMEPLLVHNVARGKAAQERVAWLLERVGLKPEHARRYPHEFSGGQRQR 476
           ASL+PR+TVG +I EP L H +   + A+E VA +L +VGL P+ A RYPHEFSGGQRQR
Sbjct: 410 ASLNPRMTVGAAIAEPFLEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQR 469

Query: 477 ICIARALALNPKVVIADESVSALDVSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERIS 536
           ICIARALAL PKV++ADESVSALDVSI+AQ++NL+LDLQ+   +AFLFISHDMAVVER+S
Sbjct: 470 ICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVS 529

Query: 537 HRVAVMYLGQIVEIGPRRAVFENPQHAYTRKLMAAVPVADPNHAYKRQPLLVDEIPSPIR 596
           HRVAVMYLG+IVEIGPR  VF+NPQH YTRKLMAAVPV DP+    R+    DE+ SPIR
Sbjct: 530 HRVAVMYLGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIR 589

Query: 597 ALGDEPVTAPLVQVGPGHFVA 617
            +          +V PGH VA
Sbjct: 590 PVDYTANPRAYREVSPGHLVA 610