Pairwise Alignments

Query, 300 a.a., transcriptional regulator CynR from Serratia liquefaciens MT49

Subject, 342 a.a., Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  134 bits (336), Expect = 4e-36
 Identities = 92/287 (32%), Positives = 139/287 (48%), Gaps = 5/287 (1%)

Query: 3   LRHIRYFLAVAEQGNFTRAAEALHVSQPTLSQQIKQLEENLGTPLFDRSGRTVRLTDAGM 62
           +R +RYF+AVAE+ NF RAAE LH+SQP LS QIK LEE LG  LF+R+ R V +T A  
Sbjct: 4   IRQLRYFIAVAEELNFMRAAERLHISQPPLSVQIKALEEELGVQLFERTNRGVLMTPASQ 63

Query: 63  AWMRYARLALQDLEAGTRAIHDVATLERGNLRLAMTPTFTAYLVGPVIDAFYRQYPGVSV 122
            +    R  L  LE         A  + G+L +         ++   +     +YPG+ +
Sbjct: 64  TYYVEVRAVLARLEHARILAQRSARGDTGSLAVGFVSIANVTMLPQALKLCRERYPGIEL 123

Query: 123 SIHEMTQDRIEALLAEDRLDVGIAFSQAQSVDIVAEELFTESLNMMVGAQHPLVQQREPL 182
            + E T D     L  +++D+GIA        +  + LF E L + +         + P 
Sbjct: 124 HLSEETLDMQVPNLLTNKIDIGIAPGPINEPGLSFQPLFDERLVLALPDSMKEAHMKSP- 182

Query: 183 SAQVFEQQPLVLLSEDFATRQF--IDDYCRRQGIRPRVAMEANAIGAIIEIVRRGQLATL 240
           S  +F+ QP VL     A   +  + DYC R G  P +   A  +  II IV  G   +L
Sbjct: 183 SMALFKHQPFVLFGRPMAPGLYDAVQDYCARAGFTPEIVQYARQMQTIISIVSTGLCISL 242

Query: 241 LPAAVAQ-ENPQLHPVRLTDVMPARRAVLLQRKDAYRSAASRAFIEV 286
           +P++++Q + P +  V   +  P  R  LL R    R+ A + FI++
Sbjct: 243 IPSSLSQLQRPGVAYVVPKEPSPIVRMGLLYRTQD-RNPAVKNFIDI 288