Pairwise Alignments

Query, 175 a.a., type 1 fimbrial protein from Serratia liquefaciens MT49

Subject, 180 a.a., putative fimbrial-like protein (VIMSS) from Escherichia coli BW25113

 Score = 91.7 bits (226), Expect = 6e-24
 Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 17/178 (9%)

Query: 8   LAALVLSAT-AYNATAASGNVKFTGEIVQSTCKVVDKDQNKEVYLGKYPTTAFPTSGSTS 66
           LAA + +AT +Y A    G + F GE+V + C V     ++ V LG+Y T  F   G+TS
Sbjct: 10  LAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTS 69

Query: 67  GAKAFDISLEKCE---AGNYTLRFDGNTPAGHPELLAVTGGAN-----GVGVEILDNNGA 118
               F I L  C+   A N  + F G   A +  LLA+    N     GVG+EILDN  A
Sbjct: 70  ALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSA 129

Query: 119 TL-PISQEVATPATVSVAADGDNPGSATFNLRARYKSYQDLVTAGQANSNATFTIEYK 175
            L P     +T   +        PG+   +  ARYK      +AGQAN++ATF + Y+
Sbjct: 130 ILKPDGNSFSTNQNLI-------PGTNVLHFSARYKGTGTSASAGQANADATFIMRYE 180