Pairwise Alignments

Query, 628 a.a., sigma-54-dependent Fis family transcriptional regulator from Serratia liquefaciens MT49

Subject, 457 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  269 bits (688), Expect = 2e-76
 Identities = 147/312 (47%), Positives = 203/312 (65%), Gaps = 4/312 (1%)

Query: 10  DPASLAFQNVLDRLAPTDATVLIVGETGTGKELMARYLHHHSLRRDRPFLAVNCGALTES 69
           DP       + +++A +DA+++I GE+GTGKEL+AR++H+ S R D+ F+AVNC A+ E+
Sbjct: 123 DPRMGQTLKLAEQVANSDASIMITGESGTGKELIARFIHNKSKRSDKRFVAVNCAAIPEN 182

Query: 70  LAESELFGHEKGAFTGAVDRHQGWFEAAEGGTLLLDEIGELSLPLQVKLLRVLQEREVTR 129
           L ESELFGHEKGAFTGAV R  G FE A+GGTLLLDEI E+ + LQ KLLR +QE+E+ R
Sbjct: 183 LLESELFGHEKGAFTGAVARRIGKFEEAQGGTLLLDEISEMDVRLQSKLLRAIQEKEIDR 242

Query: 130 VGSHRPVKVNVRVVAATHVDLANAIRERRFREDLYYRLNVAAVTLPPLRQRRQDIPLLAE 189
           VG ++PVKV+VR++A ++  + + +R+  FREDLYYRLNV  + LP LR+R  DI +LAE
Sbjct: 243 VGGNQPVKVDVRILATSNRTMEDEVRKGTFREDLYYRLNVVTLALPALRERPLDIAVLAE 302

Query: 190 HFLTLYARRLGRPQLRLSAEALATLMDYPWPGNIRELENTLHNAVLLSKAPLITPQQLRL 249
           HF+  Y    G P  +LSAEA   L  + W GN+RELENT+H AVLL+    I P+ + L
Sbjct: 303 HFVKRYTEANGLPTRQLSAEARQLLSRHHWRGNVRELENTMHRAVLLASGAEIGPEAMIL 362

Query: 250 SAEMASLPPQGDASLDSFLRQQLVGNDGPLYQRVIDSLVRNAF--ELSQ--GNQLQAAAL 305
           S       P    +  +     ++G  G +  + +  + R+     LS   GN+  AA +
Sbjct: 363 SGNPVGTNPDPMVAQAANAAASVIGARGGMVGKTVAEVERDLIIDTLSHCLGNRTHAANI 422

Query: 306 LGISRNTLRTHL 317
           LGIS  TLR  L
Sbjct: 423 LGISIRTLRNKL 434