Pairwise Alignments

Query, 259 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  218 bits (556), Expect = 8e-62
 Identities = 113/251 (45%), Positives = 152/251 (60%)

Query: 1   MKSLKTLIAAGCLLAAGSTLAAENTLRFGLEALYPPFESKSASGQLVGFDIDLGNAVCAA 60
           MK L  L A    + +  + AAE  L+ G+EA YPPF  K   G + GFD D+GNA+C  
Sbjct: 1   MKKLALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEE 60

Query: 61  AQLKCSWVETSFDSLIPALKARKFDAINSAMNVTDQRRQAIDFTDSIYQVPNRLIAKADS 120
            + KC+WVE  FD LIPALK RK DAI S+M++TD R++++DFT   Y  P RL+ K  +
Sbjct: 61  MKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGT 120

Query: 121 GLLPNATSLAGKHVGVLQGSIQETYAKAHWAPQGVDVVSYQDQNQAYLDLTAGRLDATLV 180
            +  +   L GK +GV +GSI + +AK     +G  VV Y  QN+ YLD+ AGRLD T+ 
Sbjct: 121 TVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVA 180

Query: 181 MAPSGQSGFLAHPDGKGFAFVGDAVSDDKILGEGIAFGLRKGDEALKKKLNEAIVKVKQQ 240
            A   + GFL    GKGFAFVG A +D K  G+GI   +RKGD+A   ++N AI  ++  
Sbjct: 181 DATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRAN 240

Query: 241 GTVSELAKKYF 251
           G   E+  KYF
Sbjct: 241 GKYKEIESKYF 251