Pairwise Alignments

Query, 648 a.a., PTS N-acetyl glucosamine transporter subunit IIABC from Serratia liquefaciens MT49

Subject, 498 a.a., N-acetylglucosamine-specific PTS transporter subunit IIBC from Pectobacterium carotovorum WPP14

 Score =  399 bits (1024), Expect = e-115
 Identities = 220/505 (43%), Positives = 311/505 (61%), Gaps = 53/505 (10%)

Query: 1   MNILGFFQRLGRSLQLPIAVLPVAALLLRFGQ--------PDLLNISFIAQAGGSIFDNL 52
           M+ L + Q++GR+L +P+A LP AA+L+  G          +    + + ++G +I  ++
Sbjct: 1   MSTLSYLQKVGRALMVPVATLPAAAILMGIGYWIDPVGWGSENALAALLIKSGEAIIGHM 60

Query: 53  ALIFAIGVAATWSKDNAGSAALAGAVGYFILTK-------AMVTINPAINMGV------- 98
           A++FA+GVA   SKD  G+AAL G VGY +LT        AM+   P   +         
Sbjct: 61  AVLFAVGVAYGMSKDKDGAAALTGFVGYLVLTTLCSPAVVAMIQRIPVEQVPAAFGKIEN 120

Query: 99  -LAGIITGLVGGAVYNRWSGIKLPEFLSFFGGKRFVPIATGFFCLILAAIFGYIWPPVQN 157
              GI+ G++   +YNR+S ++LP+ LSFF G+R VPI   F  +++A I  Y+WP + N
Sbjct: 121 QFIGILVGVMSAELYNRFSQVELPKALSFFSGRRLVPILVSFLMILVAFILMYVWPVIYN 180

Query: 158 AIHAGGEWIVSMGAVGSGIFGFVNRLLIPTGLHQVLNTIAWFQIGEFTNAAGTIFHGDIN 217
           A+ + GE+I  +G+VG+G++ F NRLLIP GLH  LN++ WF +             DI 
Sbjct: 181 ALVSFGEYIQQLGSVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGIN---------DIP 231

Query: 218 RFYAGD----------GTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSV 267
            F AG           G  G + +GFFPIMMFGLPGAALA+Y  A  E +  V G++L+ 
Sbjct: 232 NFLAGQQSIDSGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKSKVAGIMLAA 291

Query: 268 ALTAFLTGVTEPLEFLFMFLAPLLYLVHAILTGISLFVATLLGIHAGFSFSAGAIDYVLM 327
           A  +F TG+TEPLEF FMF+AP+LY +HA+LTG S+F+A  +   AGF FSAG +D VL 
Sbjct: 292 AFASFFTGITEPLEFSFMFVAPVLYFLHALLTGFSVFIAASMHWIAGFGFSAGLVDMVLS 351

Query: 328 YNLPAASKNVWMLVVMGLVAFAVYFVLFSIIIRAFNLKTPGRE--------DASDDIVAP 379
              P A++  +ML+  GLV F +Y+V+F   I  FNL TPGRE        D  D   A 
Sbjct: 352 SRNPLATQ-WYMLLAQGLVFFVIYYVVFRFTITRFNLLTPGRELAVSGSEADGYDVSTAS 410

Query: 380 EANSNTDEGLRALSRSYIGAIGGSDNLTGIDACITRLRLSVKDSSKVLDASCKRLGASGV 439
               ++D  +  L+R Y+ A+GG  NLTGIDACITRLRL+V DSS V DA  KRLGA+GV
Sbjct: 411 AGEKSSDAAV--LARGYLQALGGKANLTGIDACITRLRLNVADSSLVDDAQAKRLGAAGV 468

Query: 440 VKLNKQTVQVIVGSKAEAIADGMRA 464
           ++LNKQ+VQ++VG++AE+IA  ++A
Sbjct: 469 IRLNKQSVQIVVGTQAESIATALKA 493