Pairwise Alignments

Query, 159 a.a., cold shock domain-containing protein from Serratia liquefaciens MT49

Subject, 69 a.a., constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein from Escherichia coli BL21

 Score = 45.1 bits (105), Expect = 2e-10
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 1  MNGKITTFFEDKGFGFITDENGENR---YFHVIKVQNPELIKKNAAVTFEPTNNTKGPSA 57
          + G +  F E KGFGFIT E+G      +F  I+    + + +   V FE TN  KGPSA
Sbjct: 4  IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63

Query: 58 FAVKVL 63
            V  L
Sbjct: 64 ANVIAL 69