Pairwise Alignments

Query, 486 a.a., diguanylate cyclase from Serratia liquefaciens MT49

Subject, 477 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  144 bits (363), Expect = 7e-39
 Identities = 86/191 (45%), Positives = 114/191 (59%), Gaps = 2/191 (1%)

Query: 280 GIAMLVMGPLILSSSIAVNRKLLRRLEHSANHDFLTGVLARNALTRKAGEMLEHKYKSKE 339
           G A   MG + + + I   + +  +L H A  D LTG L R A    A + LE   +   
Sbjct: 286 GTADEPMGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGN 345

Query: 340 AVSLLLIDIDHFKQINDTHGHLAGDQVLASFAHIVRRELRHDQLFGRLGGEEFAIMLPRA 399
           AVS+L+IDIDHFKQ+ND HGH  GD+ L +    +R  LR    FGRLGGEEFA MLP  
Sbjct: 346 AVSVLMIDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPET 405

Query: 400 LAAQGVALAEHLRQLVQKTELYPG-GKVPLKITISVGVANLAMNEVKSLEQLMNMADIAL 458
             A  + +AE LRQ V+   L  G  + PL++T S+GVA     EV +++Q++  AD AL
Sbjct: 406 TLAGALLVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEV-AVDQVLARADTAL 464

Query: 459 YRAKSQGRNRV 469
           YRAK++GRNRV
Sbjct: 465 YRAKAEGRNRV 475