Pairwise Alignments

Query, 162 a.a., type VI secretion system contractile sheath small subunit from Serratia liquefaciens MT49

Subject, 168 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 95.1 bits (235), Expect = 5e-25
 Identities = 54/128 (42%), Positives = 78/128 (60%), Gaps = 5/128 (3%)

Query: 3   NTQNKLGKIRAPRVKITYDIENGGTDSKKELPLVLGVVGDFA-KQDESL---RDRRFLHI 58
           ++Q  + + RAPRV+I YD+E  G + K +LP V+GV+ D A K  E L    DR+FL +
Sbjct: 5   SSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAPVADRKFLEV 64

Query: 59  DKDNFNDVMEGMAPSVELRVDSTIPGKDGQLAVSLQFNSMEDFSPENVAMQVEPLKNLLA 118
           D DNF+  ++ M P V   V + + G +G L++ + F SM+DFSP  VA +V+ L  LL 
Sbjct: 65  DVDNFDSRLKAMQPRVAFHVPNELTG-EGNLSLDITFESMDDFSPAAVARKVDSLNQLLE 123

Query: 119 LREQLTEL 126
            R QL  L
Sbjct: 124 ARTQLANL 131