Pairwise Alignments

Query, 265 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  126 bits (317), Expect = 4e-34
 Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 22/264 (8%)

Query: 9   GLELLVADFSDHRFDVHWHETWSIGVVLRGANNNSAKGDADGIVSRGQISLIAPGQMHAG 68
           G+E L A F  H +  H H+T+SIG +  G+  ++ +G  +     G + LI P ++H G
Sbjct: 19  GMECLSATFLTHEYSPHAHDTFSIGAIESGSQISTIQGTTEQ-TGPGHLYLINPDEVHDG 77

Query: 69  TVLGAAGCHYFMFYPSHEMLLDAAENME------MPLPPAVKGKHIGHAP---FANRLCE 119
              G  G  Y M YP  E+L D  E++       MP  P    +    A     A+R  E
Sbjct: 78  AP-GGGGYRYRMIYPDAELLRDIIEDVTGRVFHGMPSFPKFLPRDPQMAASFQMAHRRLE 136

Query: 120 AATVLTAAQSSRFDREVAW--SHCVADLLAVCSPRRAPLTDAGIAPGLRRAKEYLHDNPA 177
           A T    A    F    A    H  A +LAV +  +  + +A         ++YL DN  
Sbjct: 137 AKTGALEADEGMFSVLAALFGRHGSAIILAVETREKTAVYNA---------RDYLTDNYE 187

Query: 178 REVRLERLAQAAGLSRFHLCRQFSATFGLSPSRYQRQLRLQQAKALLSRGGDIAEIAIAC 237
            ++ LE LA  AGLSR HL R F   F ++P  Y   +R++QA+ LL  G   AE+A  C
Sbjct: 188 TDIGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPAEVAALC 247

Query: 238 GFADQSHLGRTFKSSYGVTPRGYR 261
           GFADQ+H  R FK+  GVTP  +R
Sbjct: 248 GFADQAHFTRHFKARTGVTPGQFR 271