Pairwise Alignments

Query, 592 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 595 a.a., lipid A export permease/ATP-binding protein MsbA from Magnetospirillum magneticum AMB-1

 Score =  248 bits (632), Expect = 7e-70
 Identities = 161/585 (27%), Positives = 299/585 (51%), Gaps = 11/585 (1%)

Query: 8   WPTLKRLLAYGS-PYRKPLGLAVLMLWVAAAAEVAGPILISYFIDNYVAKGQLPLMIVCG 66
           W  ++RL   G  PY   +  AV  + V AAA     +L+   ++    + +   ++   
Sbjct: 13  WVLVRRLFNEGMRPYMGKVMAAVFCMVVGAAANAGYALLMDPVVNKIFTEKRPEFLLP-- 70

Query: 67  LAAAYILLELLAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQPVGQLIS 126
           LA A +    + +  +Y +A+  ++  + V+  +++ +    +R  ++ F     G+++S
Sbjct: 71  LALAVLGTFAVKSVCNYGEAVFLSKVGLRVIADMQSRLFAHLMRLDVAFFHANSTGRILS 130

Query: 127 RVTNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALVAICIFPAVFVVMGIYQ 186
           R+TND   ++      ++   K A+ +  ++ AMF  DWR++     IFP   + +    
Sbjct: 131 RLTNDISQMRFAVSDALTGAGKDASSVIFLIGAMFYQDWRLSAWTFFIFPIAILPIRKLG 190

Query: 187 YYSIPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQIRFGERMSAASRSHYTARMQTLR 246
                +    + ++  +     + + G+ V++ +  +     ++ A          +  R
Sbjct: 191 RRMRKVTANTQEHMGQLTTYLEQAVQGIRVVKAYGMEEYEKRKVGALVEMLQDLIYKAAR 250

Query: 247 LDGFLLRPLLSLFSALVLCGLLMLFGFSG--EGSIGVGVLYAFINYLGRLNEPLIELTSQ 304
           +      P++ L   + +  +++L+G +    G    G  ++FI  L     P+  L + 
Sbjct: 251 VRS-ASSPIMELLGGIAIT-VVILYGGTRVVNGETTPGAFFSFITALMLAYRPIKSLAAM 308

Query: 305 QSILQQAVVAGERIFELMDRRQQSY---GTDDRPLESGRIDIEDLSFAYRDDKKVLQHIS 361
            + LQ+ + A  R F ++D +   +   G  D  +  G +  E + F Y   K VL  I 
Sbjct: 309 NTNLQEGLAAASRTFSVLDTQPTIFEKDGAADLVVLEGNVSFEGVFFTYDGSKAVLDGID 368

Query: 362 LSVPSRGFVALVGHTGSGKSTLANLLMGYYPVNQGEVRLDGRPLASLSHRTLRQGVAMVQ 421
           L+VP    VALVG +G+GKST+ NLL  +Y V  G V +DG+ + ++S  +LR  +A+V 
Sbjct: 369 LAVPGGKTVALVGPSGAGKSTVLNLLPRFYDVTDGHVLVDGQDVRNVSLSSLRSKIALVS 428

Query: 422 QDPVVIAESVLANVTLGR-NISEEIVWQALETVQLAELVRSFPQGIHTRLGEQGNNLSVG 480
           Q+  +  +S+ AN+  GR   ++E +  A  +    + + S P+G  T +GE+G NLS G
Sbjct: 429 QEITLFDDSIRANIAYGRFGATDEEIEAAARSAAAHDFIVSLPEGYDTVVGERGLNLSGG 488

Query: 481 QKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRLIREHTTLVVIAHRLSTIVD 540
           Q+Q LA+AR +++   IL+LDEAT+ +D+ +E+ +Q AL L+    T +VIAHRLST+V+
Sbjct: 489 QRQRLAIARAMLKNAPILLLDEATSALDTESERQVQTALELLMRGRTTIVIAHRLSTVVN 548

Query: 541 ADSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQLVGEELAAAN 585
           AD I VL +G+ +E G+H  L+A+ G Y ++Y +Q   E + A +
Sbjct: 549 ADLIHVLDKGRVIESGDHNALMAKNGTYARLYAMQFAEEAVKAGS 593