Pairwise Alignments

Query, 592 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  236 bits (603), Expect = 1e-66
 Identities = 170/584 (29%), Positives = 283/584 (48%), Gaps = 30/584 (5%)

Query: 11  LKRLLAYGSPYRKPLGLAVLMLWVAAAAEVAGPILISYFIDNYVAKGQLPLMIVC--GLA 68
           L+R  AY  PYR    L      ++   E+  P+ +  F+D  +  GQ  +++    GL 
Sbjct: 2   LRRFFAYYRPYRGLFILDFSCAVLSGVLELGFPMAVKAFVDVLLPGGQWGIILAASVGLL 61

Query: 69  AAYILLELLAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQPVGQLISRV 128
             Y+L   L A + Y+  +L     + +   +R    D   +     FD Q  G L+ R+
Sbjct: 62  VIYVLNTGLMATVTYWGHML----GINIETDMRRLAFDHLQKLSFRYFDNQKTGHLVGRL 117

Query: 129 TNDTEVI--------KDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALVAICIFPAVFV 180
           T D E I        +DL++ +++        IGA L+ M S++ ++ALV   + P    
Sbjct: 118 TKDLEEIGEVAHHGPEDLFIAIMT-------FIGAFLL-MMSVNVQLALVTAAVVPVTAW 169

Query: 181 VMGIYQYYSIPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQIRFGERMSAASRSHYTA 240
           V   Y        R +   + D N    E + GM V+Q F  +          ++ +   
Sbjct: 170 VTSRYGGRMTQNFRALYGRVGDFNARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRT 229

Query: 241 RMQTLRLDGFLLRPLLSLFSALVLCGLLMLFG--FSGEGSIGVGVLYAFINYLGRLNEPL 298
           ++   ++        LS  S  +   ++M+ G  F   GS+  G    F+  +G    P+
Sbjct: 230 KLDAYKI--MAASTSLSYMSMRLTQMIVMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPV 287

Query: 299 IELTSQQSILQQAVVAGERIFELMDRRQQSYGTDDR---PLESGRIDIEDLSFAYRDDKK 355
            ++ S      + +    R  EL+D         D    P  SG I+   + F Y + K+
Sbjct: 288 EKINSVIETYPKGIAGFRRFTELLDTAPDIVDAPDAIDAPALSGAIEYRHVGFGYAEGKR 347

Query: 356 VLQHISLSVPSRGFVALVGHTGSGKSTLANLLMGYYPVNQGEVRLDGRPLASLSHRTLRQ 415
           VL +I L + +   VA VG +G+GK+TL +LL  +Y V  G + +DG  +  +   +LR 
Sbjct: 348 VLDNIDLKISAGETVAFVGPSGAGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRN 407

Query: 416 GVAMVQQDPVVIAESVLANVTLGR-NISEEIVWQALETVQLAELVRSFPQGIHTRLGEQG 474
            + +VQQD  +   ++  N+  GR   S+E +  A    +L  ++ + P G+ T +GE+G
Sbjct: 408 QIGIVQQDVFLFGGTIRENIEYGRLGASDEEIMDAARRARLDGVIEAMPLGLDTVIGERG 467

Query: 475 NNLSVGQKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRLIREHTTLVVIAHR 534
             LS GQKQ LA+AR+ ++ P ILILDEAT+ +D+ TE+AIQ++L  + +  T +VIAHR
Sbjct: 468 VKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHR 527

Query: 535 LSTIVDADSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQLVG 578
           L+TI DA  I+V+ +    E G H +LLA +G Y ++++ Q  G
Sbjct: 528 LATIRDASRIVVVDQTGIAETGAHAELLAAKGHYSRLHEAQFSG 571