Pairwise Alignments

Query, 784 a.a., endopeptidase La from Serratia liquefaciens MT49

Subject, 798 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 1061 bits (2743), Expect = 0.0
 Identities = 529/764 (69%), Positives = 638/764 (83%), Gaps = 1/764 (0%)

Query: 9   IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGINDL 68
           IE+P+LPLRDVVVYPHMVIPLFVGREKSI  LEAAM  DK+I+L+AQK  + D+PG + L
Sbjct: 5   IELPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGDKQILLLAQKNPADDDPGEDAL 64

Query: 69  FSVGTVASILQMLKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQE 128
           + VGT+A++LQ+LKLPDGTVKVLVEG QR  +    +   H  A+   ++     ERE E
Sbjct: 65  YRVGTIATVLQLLKLPDGTVKVLVEGEQRGAVERFMEVDGHLRAEVALIDEVEAPERESE 124

Query: 129 VLVRTAINQFEGYIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLSDKQSVLEMFD 188
           V VR+ ++QFE Y++L KK+P EVL+SLNSID+ +RL DT+AAHM LK+  KQ +LE+ D
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQDILEIID 184

Query: 189 ITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAP 248
           ++ R+E+++A++++EIDLLQVEKRIR RVKKQME+SQREYYLNEQMKAIQKELG+ ++  
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSEEGH 244

Query: 249 DEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNARSK 308
           +E E LK++I+AA +PKDA  K  AEL KLK MSPMSAEATVVR YIDW++QVPW A++K
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPWKAQTK 304

Query: 309 VKKDLVKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQS 368
           V+ DL +A+++LD DHYGLE VK+RILEYLAVQ RV KI+GP+LCLVGPPGVGKTSL +S
Sbjct: 305 VRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAES 364

Query: 369 IAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKM 428
           IA AT R++VRMALGGVRDEAEIRGHRRTYIGSMPG+LIQKM KVGV+NPLFLLDEIDKM
Sbjct: 365 IANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKM 424

Query: 429 SSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVI 488
            SDMRGDPASALLEVLDPEQN  FNDHYLEVDYDLSDVMF+ TSNSMNIP  LLDRMEVI
Sbjct: 425 GSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVI 484

Query: 489 RLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAIIGIIRYYTREAGVRSLEREI 548
           RL GYTEDEK+NIA ++L PKQ+  N LKKGE+  +   I  I+RYYTREAGVR LER+I
Sbjct: 485 RLPGYTEDEKINIAVKYLAPKQISANGLKKGEIEFEVETIRDIVRYYTREAGVRGLERQI 544

Query: 549 SKLCRKAVKTLLMDKKIKHIEINGDNLKDYLGVQRVDYGRADTENRVGQVTGLAWTEVGG 608
           +K+CRKAVK   ++K+   +++  D+L+ +LGV++  YG A+ +++VGQVTGLAWT+VGG
Sbjct: 545 AKICRKAVKEHALEKRFS-VKVTADSLEHFLGVKKFRYGLAEQQDQVGQVTGLAWTQVGG 603

Query: 609 DLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINADFYEKRDIHVHV 668
           +LLTIE A +PGKG+L  TGSLG+VM ESI AA TVVR+RA  LGI  DF+EK D H+H+
Sbjct: 604 ELLTIEAAVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRAKSLGIPLDFHEKHDTHIHM 663

Query: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
           PEGATPKDGPSAG+ MCTALVS LTG PVRADVAMTGEITLRGQVL IGGLKEKLLAAHR
Sbjct: 664 PEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHR 723

Query: 729 GGIKTVLIPYENKRDLEEIPDNVIADLEIHPVQRIDEVLNLALQ 772
           GGIKTV+IP EN RDL+EIPDN+  DL+I PV+ IDEVL +ALQ
Sbjct: 724 GGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767